BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046516
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39619.3| unnamed protein product [Vitis vinifera]              128   4e-28
ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containi...   128   4e-28
ref|XP_002330073.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containi...    76   3e-12
ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containi...    65   6e-09

>emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  128 bits (322), Expect = 4e-28
 Identities = 60/103 (58%), Positives = 77/103 (74%)
 Frame = +3

Query: 9   PTCKPTINLSILNTHLLKCQNHKQFNQILSQMLTTAYIKDTYAASKLLKFSTESPFIHID 188
           PT KPTI LSIL THL  C N KQFN+ILSQM+ T +I DT+AAS+LLKFST+SPFI +D
Sbjct: 21  PTFKPTITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLD 80

Query: 189 YSCKIFGYVENPLGFIYNTMMRGYLNENCVKNIIFFYRMMLLN 317
           YS +IF  +EN  GF++NTMMR Y+  N  +  +  Y++M+ N
Sbjct: 81  YSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKN 123


>ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  128 bits (322), Expect = 4e-28
 Identities = 60/103 (58%), Positives = 77/103 (74%)
 Frame = +3

Query: 9   PTCKPTINLSILNTHLLKCQNHKQFNQILSQMLTTAYIKDTYAASKLLKFSTESPFIHID 188
           PT KPTI LSIL THL  C N KQFN+ILSQM+ T +I DT+AAS+LLKFST+SPFI +D
Sbjct: 33  PTFKPTITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLD 92

Query: 189 YSCKIFGYVENPLGFIYNTMMRGYLNENCVKNIIFFYRMMLLN 317
           YS +IF  +EN  GF++NTMMR Y+  N  +  +  Y++M+ N
Sbjct: 93  YSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKN 135


>ref|XP_002330073.1| predicted protein [Populus trichocarpa] gi|222871498|gb|EEF08629.1|
           predicted protein [Populus trichocarpa]
          Length = 793

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/100 (60%), Positives = 76/100 (76%)
 Frame = +3

Query: 12  TCKPTINLSILNTHLLKCQNHKQFNQILSQMLTTAYIKDTYAASKLLKFSTESPFIHIDY 191
           T KPT+ L IL THL KCQN KQFNQILSQM+ + + KD++AAS+LLKFSTE PFI+I+ 
Sbjct: 19  TLKPTLTLPILETHLQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQ 78

Query: 192 SCKIFGYVENPLGFIYNTMMRGYLNENCVKNIIFFYRMML 311
           S +IF ++ENP GFI NTMM+GY+  N     I+ Y+ ML
Sbjct: 79  SYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFML 118


>ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 35/72 (48%), Positives = 49/72 (68%)
 Frame = +3

Query: 102 MLTTAYIKDTYAASKLLKFSTESPFIHIDYSCKIFGYVENPLGFIYNTMMRGYLNENCVK 281
           ML T +I++TYAAS+L+KFST  PFIHIDY+ +IF ++EN   F++N M+R Y+  N   
Sbjct: 1   MLLTGFIRETYAASRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPH 60

Query: 282 NIIFFYRMMLLN 317
                Y+ ML N
Sbjct: 61  FAFTLYKSMLSN 72


>ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
 Frame = +3

Query: 27  INLSILNTHLLKCQNHKQFNQILSQMLTTAYIKDTYAASKLLKFSTES-PFIHIDYSCKI 203
           + +S L++ L  C+  + F Q+LSQ + T  I D YAAS+L+ FS+ S   +   YS +I
Sbjct: 1   MKVSTLDSLLQSCKCPRHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRI 60

Query: 204 FGYVENPLGFIYNTMMRGYLN-ENCVKNIIFFYRMML 311
           F ++ NP  F +NT+MR +L  +N     +  Y++ L
Sbjct: 61  FNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFL 97