BLASTX nr result

ID: Cnidium21_contig00046501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046501
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336062.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_002298642.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33
emb|CBI21323.3| unnamed protein product [Vitis vinifera]              141   6e-32
ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containi...   141   6e-32

>ref|XP_002336062.1| predicted protein [Populus trichocarpa] gi|222869847|gb|EEF06978.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  146 bits (369), Expect = 2e-33
 Identities = 70/105 (66%), Positives = 88/105 (83%)
 Frame = +1

Query: 1   NDYKEFIYALISERMICEAKDLGEIIVSGKFPVEEDVLNALIGSVSSIDPCSAIYFLNFM 180
           NDY+EFI  LI+ER I EAK+LGE+I SG FP+E+DVLNALIGSVS+IDP SA+ F +F+
Sbjct: 295 NDYREFILGLITERRIYEAKELGEVIASGNFPMEDDVLNALIGSVSTIDPYSAMKFFHFV 354

Query: 181 LEKQRLPAILTMSNLSRSLCKHGKIEELLEVYEVLSAKEYFADSE 315
           + K + P +LT+SNL R+LCKHGKI+ELLEVY VLS+ EYF+D E
Sbjct: 355 IGKGKFPTLLTLSNLCRNLCKHGKIDELLEVYRVLSSNEYFSDME 399


>ref|XP_002298642.1| predicted protein [Populus trichocarpa] gi|222845900|gb|EEE83447.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  146 bits (369), Expect = 2e-33
 Identities = 70/105 (66%), Positives = 88/105 (83%)
 Frame = +1

Query: 1   NDYKEFIYALISERMICEAKDLGEIIVSGKFPVEEDVLNALIGSVSSIDPCSAIYFLNFM 180
           NDY+EFI  LI+ER I EAK+LGE+I SG FP+E+DVLNALIGSVS+IDP SA+ F +F+
Sbjct: 295 NDYREFILGLITERRIYEAKELGEVIASGNFPMEDDVLNALIGSVSTIDPYSAMKFFHFV 354

Query: 181 LEKQRLPAILTMSNLSRSLCKHGKIEELLEVYEVLSAKEYFADSE 315
           + K + P +LT+SNL R+LCKHGKI+ELLEVY VLS+ EYF+D E
Sbjct: 355 IGKGKFPTLLTLSNLCRNLCKHGKIDELLEVYRVLSSNEYFSDME 399


>ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Glycine max]
          Length = 647

 Score =  145 bits (366), Expect = 3e-33
 Identities = 69/105 (65%), Positives = 87/105 (82%)
 Frame = +1

Query: 1   NDYKEFIYALISERMICEAKDLGEIIVSGKFPVEEDVLNALIGSVSSIDPCSAIYFLNFM 180
           +DY++ I  L+SER I EAK++GE+IV G FPVE+DVLNALIGSVSS+DP SAI F NFM
Sbjct: 291 SDYRDLILGLVSERRIYEAKEVGEVIVGGNFPVEDDVLNALIGSVSSVDPGSAIVFFNFM 350

Query: 181 LEKQRLPAILTMSNLSRSLCKHGKIEELLEVYEVLSAKEYFADSE 315
           +EK+R P ILT+SNLSR+LC HGK++ELLEV+ VL++  YF D E
Sbjct: 351 VEKERFPTILTISNLSRNLCGHGKVDELLEVFHVLNSHNYFKDVE 395


>emb|CBI21323.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/105 (61%), Positives = 85/105 (80%)
 Frame = +1

Query: 1   NDYKEFIYALISERMICEAKDLGEIIVSGKFPVEEDVLNALIGSVSSIDPCSAIYFLNFM 180
           NDY+EFI+ LISER I EAK+LGE+I++G FP+  DVLNAL+GSVSSIDP SA+ F  FM
Sbjct: 295 NDYREFIFVLISERRIPEAKELGEVIINGNFPIGNDVLNALVGSVSSIDPGSAMLFFKFM 354

Query: 181 LEKQRLPAILTMSNLSRSLCKHGKIEELLEVYEVLSAKEYFADSE 315
           + K+  P +LT+SNL R+LCK GK +ELLEV+ +LS++ YF+D E
Sbjct: 355 ISKESFPTLLTLSNLGRNLCKRGKADELLEVFHILSSRNYFSDLE 399


>ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080
           [Vitis vinifera]
          Length = 660

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/105 (61%), Positives = 85/105 (80%)
 Frame = +1

Query: 1   NDYKEFIYALISERMICEAKDLGEIIVSGKFPVEEDVLNALIGSVSSIDPCSAIYFLNFM 180
           NDY+EFI+ LISER I EAK+LGE+I++G FP+  DVLNAL+GSVSSIDP SA+ F  FM
Sbjct: 295 NDYREFIFVLISERRIPEAKELGEVIINGNFPIGNDVLNALVGSVSSIDPGSAMLFFKFM 354

Query: 181 LEKQRLPAILTMSNLSRSLCKHGKIEELLEVYEVLSAKEYFADSE 315
           + K+  P +LT+SNL R+LCK GK +ELLEV+ +LS++ YF+D E
Sbjct: 355 ISKESFPTLLTLSNLGRNLCKRGKADELLEVFHILSSRNYFSDLE 399


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