BLASTX nr result

ID: Cnidium21_contig00046483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046483
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADJ67439.1| ethylene response factor 10 [Actinidia deliciosa]       55   4e-06
ref|XP_002306842.1| AP2/ERF domain-containing transcription fact...    55   4e-06

>gb|ADJ67439.1| ethylene response factor 10 [Actinidia deliciosa]
          Length = 216

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 39/88 (44%), Positives = 49/88 (55%)
 Frame = +3

Query: 48  SWDELLYHHSFLQSQKDDYNYNSSLLSVFTDRQLKDSIYTNSSRSTNNDEEVISKVKQEQ 227
           SWD+LL++H+ L    +D +    LL V  +   K+S  T SS     +EEV S  K   
Sbjct: 26  SWDDLLFYHNSLPFNVND-SEEMLLLGVLAEGASKESSETISSGGIK-EEEVTSVAK--- 80

Query: 228 ELADQHEIKQQEKRYIGVRKRPWGKFAA 311
              DQ  IK  EK Y GVR+RPWGKFAA
Sbjct: 81  ---DQKPIK--EKSYRGVRRRPWGKFAA 103


>ref|XP_002306842.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222856291|gb|EEE93838.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 228

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
 Frame = +3

Query: 48  SWDELLYHHSFLQSQKDDYNYNSS----LLSVFTDRQLKDSIYTNSSRSTNNDEEVISKV 215
           SWDELL+     QS    +N N S    L +   +   K+S  +NSS S   +EEV S  
Sbjct: 29  SWDELLF-----QSNSLPFNTNDSEEMVLFNALANGPPKESSESNSS-SGIKEEEVTSNA 82

Query: 216 KQEQELADQHEIKQQEKRYIGVRKRPWGKFAA 311
           K+E+E        ++EK Y GVR+RPWGK+AA
Sbjct: 83  KEEEEA-------KREKSYRGVRRRPWGKYAA 107


Top