BLASTX nr result

ID: Cnidium21_contig00046456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046456
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636005.1| Helicase-like protein [Medicago truncatula] ...   206   3e-51
gb|AAM15154.1| unknown protein [Arabidopsis thaliana] gi|2019816...   202   6e-50
ref|XP_003605523.1| Helicase-like protein [Medicago truncatula] ...   201   8e-50
ref|XP_003600273.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   201   8e-50
ref|XP_003604594.1| Helicase-like protein [Medicago truncatula] ...   200   2e-49

>ref|XP_003636005.1| Helicase-like protein [Medicago truncatula]
            gi|355501940|gb|AES83143.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1844

 Score =  206 bits (524), Expect = 3e-51
 Identities = 104/222 (46%), Positives = 145/222 (65%), Gaps = 2/222 (0%)
 Frame = +3

Query: 3    HSRFKIPIVLDDYSICNIAHDSDIAELIKQTRLIIWDEAPMQHRYSFECLDRTFRDLMRN 182
            HS+FKIP+   + S C I HDSD+A+L++QT+LIIWDEAPM H+Y+FECLDRT RD+M +
Sbjct: 1435 HSKFKIPVPTFENSTCKIDHDSDLAQLLRQTKLIIWDEAPMAHKYTFECLDRTLRDIMGD 1494

Query: 183  VNPDLYKIPFGGKTVVFGGDFRQILPVIPFASRADVVSACITRSRLWPLCKVFTLTQNMR 362
                   I FGGK +VFGGDFRQILPV+P  +R+D+V A I+ S +W  C+V TLTQNMR
Sbjct: 1495 GITKCDTI-FGGKVIVFGGDFRQILPVVPRGNRSDIVHASISASYIWDHCQVLTLTQNMR 1553

Query: 363  LIQAKTEEDKVNLKEFADWVLAIGEGNVKPFHTDLHEAND--FEIEIPVEYCNLTDSNSV 536
            L Q    E+ + + EF++W+L +GEG +        E ND   EI IP +   L   + +
Sbjct: 1554 LKQGSNPEENLQISEFSNWLLMVGEGKIA-------EPNDGYAEITIPKDMLILDFQDPI 1606

Query: 537  DKMIEFVYPGFENNYKDAKYLSERAILTPTNKTVSYVNELIV 662
              ++   YP F +NY+  +YL  RAIL  T + V  +N+ ++
Sbjct: 1607 LAIVTSTYPNFLDNYRSYEYLKNRAILASTIEVVDQINDYVL 1648


>gb|AAM15154.1| unknown protein [Arabidopsis thaliana] gi|20198162|gb|AAM15435.1|
            unknown protein [Arabidopsis thaliana]
          Length = 1308

 Score =  202 bits (513), Expect = 6e-50
 Identities = 110/222 (49%), Positives = 143/222 (64%), Gaps = 2/222 (0%)
 Frame = +3

Query: 3    HSRFKIPIVLDDYSICNIAHDSDIAELIKQTRLIIWDEAPMQHRYSFECLDRTFRDLMRN 182
            HSRF IP+ +++ S C+I+ DSD+A L+ + +LIIWDEAPM HR+ +E LDRT +D+   
Sbjct: 898  HSRFAIPLQVNETSTCSISPDSDLASLLLRAKLIIWDEAPMLHRHCYEALDRTLKDI--- 954

Query: 183  VNPDLYKIPFGGKTVVFGGDFRQILPVIPFASRADVVSACITRSRLWPLCKVFTLTQNMR 362
            V  D +K PFGGKT+ FGGDFRQILPVI   SR  ++ A +T SRLW  CKV TLT+NMR
Sbjct: 955  VQADNHK-PFGGKTITFGGDFRQILPVITKGSREQIIHASLTSSRLWNSCKVLTLTKNMR 1013

Query: 363  LIQAKTEEDKVNLKEFADWVLAIGEGNVKPFHTDLHEANDFE--IEIPVEYCNLTDSNSV 536
            L    TE+D  N+KEF+DW+L +G+G        L E ND E  I+IP +   L   + +
Sbjct: 1014 LTADPTEKD--NIKEFSDWILKLGDGK-------LSEPNDGEAAIDIPEDMLLLDSLHPI 1064

Query: 537  DKMIEFVYPGFENNYKDAKYLSERAILTPTNKTVSYVNELIV 662
            D +   VYP    N  D  +  ERAIL PTN  VS VN  I+
Sbjct: 1065 DSIANCVYPNLLQNLNDQTFFRERAILCPTNDDVSEVNNHIM 1106


>ref|XP_003605523.1| Helicase-like protein [Medicago truncatula]
            gi|355506578|gb|AES87720.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1585

 Score =  201 bits (512), Expect = 8e-50
 Identities = 99/223 (44%), Positives = 140/223 (62%)
 Frame = +3

Query: 3    HSRFKIPIVLDDYSICNIAHDSDIAELIKQTRLIIWDEAPMQHRYSFECLDRTFRDLMRN 182
            HSRF IPI++D+ S C I   S +AEL+ + +LIIWDEAPM H++ FE LDR+ RD++R 
Sbjct: 1175 HSRFGIPIIVDEISTCGIHPKSPLAELVSKAKLIIWDEAPMMHKHCFEALDRSLRDILRV 1234

Query: 183  VNPDLYKIPFGGKTVVFGGDFRQILPVIPFASRADVVSACITRSRLWPLCKVFTLTQNMR 362
             N     IPFGGK VV GGDFRQ+LPV+P A+R +VV+A I  S LW  C+V TL+ NMR
Sbjct: 1235 QNNGRTDIPFGGKVVVLGGDFRQVLPVMPKANRQEVVNASINSSYLWQFCEVLTLSTNMR 1294

Query: 363  LIQAKTEEDKVNLKEFADWVLAIGEGNVKPFHTDLHEANDFEIEIPVEYCNLTDSNSVDK 542
            L+   +  D    K+F++WVL IG+G V      +    D +IEIP +    +  + +  
Sbjct: 1295 LLHGSSSSDINERKQFSEWVLGIGDGTV-----GVANDEDIDIEIPEDLLIRSSGDHIAA 1349

Query: 543  MIEFVYPGFENNYKDAKYLSERAILTPTNKTVSYVNELIVAKI 671
            ++  +YP   +   D  +  +RAILTP N TV  +NE +++ I
Sbjct: 1350 IVNEIYPSLLDEMHDPSFFQDRAILTPKNSTVEEINEYVMSLI 1392


>ref|XP_003600273.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355489321|gb|AES70524.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1634

 Score =  201 bits (512), Expect = 8e-50
 Identities = 102/223 (45%), Positives = 139/223 (62%)
 Frame = +3

Query: 3    HSRFKIPIVLDDYSICNIAHDSDIAELIKQTRLIIWDEAPMQHRYSFECLDRTFRDLMRN 182
            HS F IP+ +++ S CN+   S  A+L++ T L IWDEAPM +R+ FE  DRT RDLM+ 
Sbjct: 1224 HSTFCIPLDINEKSTCNVTQLSIRAKLLRATSLFIWDEAPMMNRFCFEAFDRTMRDLMKK 1283

Query: 183  VNPDLYKIPFGGKTVVFGGDFRQILPVIPFASRADVVSACITRSRLWPLCKVFTLTQNMR 362
            VN D  K PFGGK VV GGDFRQILPV+    RA +V A ++ S++W  CKV  LT+NMR
Sbjct: 1284 VNKDNCKKPFGGKVVVLGGDFRQILPVVRNGPRAAIVKATVSSSKIWKDCKVLKLTKNMR 1343

Query: 363  LIQAKTEEDKVNLKEFADWVLAIGEGNVKPFHTDLHEANDFEIEIPVEYCNLTDSNSVDK 542
            L    T + +  LK FADW+L IG+G + P      E  +  I+IP E C L   N +  
Sbjct: 1344 LTGDTTNQSRNELKHFADWILKIGDGLLNP-----DENGEAHIQIPEELCILHGENPLLS 1398

Query: 543  MIEFVYPGFENNYKDAKYLSERAILTPTNKTVSYVNELIVAKI 671
            +++FVYP    N  +A Y  ++AIL PT + V  VN+ +++ I
Sbjct: 1399 LVDFVYPDIVKNIANANYFEDQAILAPTLEIVEQVNDFVLSMI 1441


>ref|XP_003604594.1| Helicase-like protein [Medicago truncatula]
            gi|355505649|gb|AES86791.1| Helicase-like protein
            [Medicago truncatula]
          Length = 1689

 Score =  200 bits (508), Expect = 2e-49
 Identities = 109/225 (48%), Positives = 142/225 (63%), Gaps = 2/225 (0%)
 Frame = +3

Query: 3    HSRFKIPIVLDDYSICNIAHDSDIAELIKQTRLIIWDEAPMQHRYSFECLDRTFRDLMRN 182
            HS+FKIP+   + S CNI   S++A+L+K T+LIIWDEAPM HR+ FE LDRT RD+M +
Sbjct: 1284 HSKFKIPVPAFENSSCNIDGTSELAQLLKMTKLIIWDEAPMAHRFCFEALDRTLRDIMSS 1343

Query: 183  VNPDLYKIPFGGKTVVFGGDFRQILPVIPFASRADVVSACITRSRLWPLCKVFTLTQNMR 362
                  KI FGGK VVFGGD RQILPVIP A+R+D+++A I  S +W  C+V TLT+NMR
Sbjct: 1344 D-----KI-FGGKVVVFGGDCRQILPVIPRANRSDIINATINSSYIWDSCEVLTLTKNMR 1397

Query: 363  LIQAKTEEDKVNLKEFADWVLAIGEGNVKPFHTDLHEAND--FEIEIPVEYCNLTDSNSV 536
            L Q     D   LK F+DW+L +GEG        L E ND   EI+IP E+      N +
Sbjct: 1398 LQQNAMSSDNQELKNFSDWLLKVGEGK-------LSEPNDGIVEIDIPAEFLIHDFDNPI 1450

Query: 537  DKMIEFVYPGFENNYKDAKYLSERAILTPTNKTVSYVNELIVAKI 671
              + +  YP F N Y D +YL  RAIL  T + V  +N+ I++ I
Sbjct: 1451 QAIFQSTYPDFLNYYNDPQYLQSRAILASTIECVEEINDYILSLI 1495


Top