BLASTX nr result

ID: Cnidium21_contig00046453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046453
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC39355.1| Met1-type cytosine DNA-methyltransferase [Daucus ...   185   4e-45
gb|AAC39356.1| Met2-type cytosine DNA-methyltransferase [Daucus ...   147   1e-33
ref|XP_002267284.2| PREDICTED: DNA (cytosine-5)-methyltransferas...   138   4e-31
emb|CBI27717.3| unnamed protein product [Vitis vinifera]              136   2e-30
emb|CBI27718.3| unnamed protein product [Vitis vinifera]              134   1e-29

>gb|AAC39355.1| Met1-type cytosine DNA-methyltransferase [Daucus carota]
          Length = 1545

 Score =  185 bits (469), Expect = 4e-45
 Identities = 95/129 (73%), Positives = 102/129 (79%)
 Frame = +2

Query: 47   TLTALEKIXXXXXXXXXXXXXXXVKDVRWNGKSVGKTSCGEAIYKQAIFYGNEIAVGGAV 226
            TLTALEK                VKD+RWN KSVG+T  GEA+YKQAI YG EIAVGGAV
Sbjct: 703  TLTALEKTPTPTSTPRKTKSIPKVKDIRWNRKSVGETLSGEALYKQAIVYGTEIAVGGAV 762

Query: 227  QIDDESAELPAIYYVEYMFETLNGKKMLHGRMLQQGSLTILGNTANECEVFLTNGRLEFE 406
             +DDESA+LPAIYYVEYMFETLNG KMLHGRMLQQGSLTILGNTANECEVFLTN  ++FE
Sbjct: 763  LVDDESAQLPAIYYVEYMFETLNGIKMLHGRMLQQGSLTILGNTANECEVFLTNDCMDFE 822

Query: 407  LMDVKKPVV 433
            L DVKK VV
Sbjct: 823  LADVKKAVV 831


>gb|AAC39356.1| Met2-type cytosine DNA-methyltransferase [Daucus carota]
          Length = 1761

 Score =  147 bits (370), Expect = 1e-33
 Identities = 80/133 (60%), Positives = 93/133 (69%), Gaps = 1/133 (0%)
 Frame = +2

Query: 47   TLTALEKIXXXXXXXXXXXXXXXVKDVRWNGKSVGKTSCGEAIYKQAIFYGNEIAVGGAV 226
            TL ALEK                +KDV WNGK   K S GE +YKQA  +GN IAVGGAV
Sbjct: 917  TLVALEKTPTPTSTPRKSKSNSKLKDVSWNGKPAVKRSSGEMLYKQATLHGNMIAVGGAV 976

Query: 227  QIDDESA-ELPAIYYVEYMFETLNGKKMLHGRMLQQGSLTILGNTANECEVFLTNGRLEF 403
              DD S   LPAIYYVEYMFE+ +GK M+HGR+L+QGS T+LGNTANE E+FLTN  +EF
Sbjct: 977  LTDDASCLNLPAIYYVEYMFESSDGK-MIHGRLLRQGSETVLGNTANEQELFLTNECMEF 1035

Query: 404  ELMDVKKPVVVDI 442
            ELMDVK PV+V+I
Sbjct: 1036 ELMDVKMPVIVEI 1048


>ref|XP_002267284.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
            vinifera]
          Length = 1530

 Score =  138 bits (348), Expect = 4e-31
 Identities = 71/132 (53%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
 Frame = +2

Query: 50   LTALEKIXXXXXXXXXXXXXXXVKDVRWNGKSVGKTSCGEAIYKQAIFYGNEIAVGGAVQ 229
            L+ALEK                 K++RW+G+ VGKTS G+ +YKQAI  G+++ VGG V 
Sbjct: 687  LSALEKTQRPSSLPGRSKLHSTSKEIRWDGEFVGKTSSGDTLYKQAIIGGDKVTVGGVVL 746

Query: 230  ID-DESAELPAIYYVEYMFETLNGKKMLHGRMLQQGSLTILGNTANECEVFLTNGRLEFE 406
            ++ DES ELP IY +E MFE+ NG+KM HGRM+Q+GS T+LGNTAN  E+FLTN  LEFE
Sbjct: 747  VEVDESDELPVIYLIECMFESFNGRKMFHGRMMQRGSQTLLGNTANARELFLTNECLEFE 806

Query: 407  LMDVKKPVVVDI 442
            L  +K+ VVVDI
Sbjct: 807  LQGIKQMVVVDI 818


>emb|CBI27717.3| unnamed protein product [Vitis vinifera]
          Length = 1417

 Score =  136 bits (343), Expect = 2e-30
 Identities = 66/109 (60%), Positives = 86/109 (78%), Gaps = 1/109 (0%)
 Frame = +2

Query: 119 KDVRWNGKSVGKTSCGEAIYKQAIFYGNEIAVGGAVQID-DESAELPAIYYVEYMFETLN 295
           K++RW+G+ VGKTS G+ +YKQAI  G+++ VGG V ++ DES ELP IY +E MFE+ N
Sbjct: 597 KEIRWDGEFVGKTSSGDTLYKQAIIGGDKVTVGGVVLVEVDESDELPVIYLIECMFESFN 656

Query: 296 GKKMLHGRMLQQGSLTILGNTANECEVFLTNGRLEFELMDVKKPVVVDI 442
           G+KM HGRM+Q+GS T+LGNTAN  E+FLTN  LEFEL  +K+ VVVDI
Sbjct: 657 GRKMFHGRMMQRGSQTLLGNTANARELFLTNECLEFELQGIKQMVVVDI 705


>emb|CBI27718.3| unnamed protein product [Vitis vinifera]
          Length = 1429

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/109 (59%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
 Frame = +2

Query: 119 KDVRWNGKSVGKTSCGEAIYKQAIFYGNEIAVGGAVQID-DESAELPAIYYVEYMFETLN 295
           K++RW+G+ VGKT  GE++YKQAI  G++IAVG  V ++ DES EL   Y+VEYMFE+L+
Sbjct: 604 KEIRWDGEFVGKTRNGESLYKQAIVCGDKIAVGDTVLVEVDESDELTITYFVEYMFESLD 663

Query: 296 GKKMLHGRMLQQGSLTILGNTANECEVFLTNGRLEFELMDVKKPVVVDI 442
           G+KM HGRM+Q GS T+LGNTANE E+F TN  +EFEL D+K+ V+V+I
Sbjct: 664 GRKMFHGRMMQHGSQTVLGNTANERELFTTNECVEFELQDIKQTVLVEI 712


Top