BLASTX nr result

ID: Cnidium21_contig00046410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046410
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276286.2| PREDICTED: katanin p60 ATPase-containing sub...   162   3e-38
emb|CBI30888.3| unnamed protein product [Vitis vinifera]              162   3e-38
ref|XP_002332658.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37
ref|XP_002519683.1| Katanin p60 ATPase-containing subunit, putat...   159   2e-37
ref|XP_002305703.1| predicted protein [Populus trichocarpa] gi|2...   156   1e-36

>ref|XP_002276286.2| PREDICTED: katanin p60 ATPase-containing subunit A-like 2 [Vitis
           vinifera]
          Length = 406

 Score =  162 bits (410), Expect = 3e-38
 Identities = 80/113 (70%), Positives = 89/113 (78%)
 Frame = +2

Query: 2   LPEPEARRSMFEEXXXXXXXXXXXXXXXMVERTEGYSGSDIRLVCKETAMQPLRRLMACL 181
           LPEPEARR+MFEE               MVERTEGYSGSDIRL+CKE AMQPLRRLMA L
Sbjct: 293 LPEPEARRAMFEELLPSVPGEEKLPYDLMVERTEGYSGSDIRLLCKEAAMQPLRRLMAHL 352

Query: 182 EKKHEVVPQDELPKVGPIRREDIEVALKNTRPSAHMHTPRYEKFNNDYGSQLL 340
           E K EVVP++ELPKVGPI+ +DIE ALKNTRPSAH+H  RY+KFN DYGSQ+L
Sbjct: 353 EDKAEVVPEEELPKVGPIKHDDIETALKNTRPSAHLHVHRYDKFNTDYGSQIL 405


>emb|CBI30888.3| unnamed protein product [Vitis vinifera]
          Length = 397

 Score =  162 bits (410), Expect = 3e-38
 Identities = 80/113 (70%), Positives = 89/113 (78%)
 Frame = +2

Query: 2   LPEPEARRSMFEEXXXXXXXXXXXXXXXMVERTEGYSGSDIRLVCKETAMQPLRRLMACL 181
           LPEPEARR+MFEE               MVERTEGYSGSDIRL+CKE AMQPLRRLMA L
Sbjct: 284 LPEPEARRAMFEELLPSVPGEEKLPYDLMVERTEGYSGSDIRLLCKEAAMQPLRRLMAHL 343

Query: 182 EKKHEVVPQDELPKVGPIRREDIEVALKNTRPSAHMHTPRYEKFNNDYGSQLL 340
           E K EVVP++ELPKVGPI+ +DIE ALKNTRPSAH+H  RY+KFN DYGSQ+L
Sbjct: 344 EDKAEVVPEEELPKVGPIKHDDIETALKNTRPSAHLHVHRYDKFNTDYGSQIL 396


>ref|XP_002332658.1| predicted protein [Populus trichocarpa] gi|222832704|gb|EEE71181.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  159 bits (403), Expect = 2e-37
 Identities = 77/113 (68%), Positives = 88/113 (77%)
 Frame = +2

Query: 2   LPEPEARRSMFEEXXXXXXXXXXXXXXXMVERTEGYSGSDIRLVCKETAMQPLRRLMACL 181
           LPEPEARR+MFEE               +VERTEG+SGSDIRL+CKE AMQPLRRLM  L
Sbjct: 201 LPEPEARRTMFEELLPSQPDEDMLPYDLLVERTEGFSGSDIRLLCKEAAMQPLRRLMTLL 260

Query: 182 EKKHEVVPQDELPKVGPIRREDIEVALKNTRPSAHMHTPRYEKFNNDYGSQLL 340
           E + E+VP DELPKVGP+R EDIE ALKNTRPSAH+H  R+EKFN+DYGSQ+L
Sbjct: 261 EDREEIVPDDELPKVGPLRSEDIETALKNTRPSAHLHAHRHEKFNSDYGSQIL 313


>ref|XP_002519683.1| Katanin p60 ATPase-containing subunit, putative [Ricinus communis]
           gi|223541100|gb|EEF42656.1| Katanin p60
           ATPase-containing subunit, putative [Ricinus communis]
          Length = 408

 Score =  159 bits (402), Expect = 2e-37
 Identities = 79/113 (69%), Positives = 87/113 (76%)
 Frame = +2

Query: 2   LPEPEARRSMFEEXXXXXXXXXXXXXXXMVERTEGYSGSDIRLVCKETAMQPLRRLMACL 181
           LPEPEARR+M+EE               +VERTEG+SGSDIRL+CKE AMQPLRRLMA L
Sbjct: 295 LPEPEARRAMYEELLPPQPDEDKLPYDLLVERTEGFSGSDIRLLCKEAAMQPLRRLMALL 354

Query: 182 EKKHEVVPQDELPKVGPIRREDIEVALKNTRPSAHMHTPRYEKFNNDYGSQLL 340
           E + EVVP DELPKVGPI  EDIE ALKNTRPSAH+H  RYEKFN DYGSQ+L
Sbjct: 355 EDRQEVVPDDELPKVGPITPEDIETALKNTRPSAHLHAHRYEKFNADYGSQIL 407


>ref|XP_002305703.1| predicted protein [Populus trichocarpa] gi|222848667|gb|EEE86214.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score =  156 bits (395), Expect = 1e-36
 Identities = 77/113 (68%), Positives = 86/113 (76%)
 Frame = +2

Query: 2   LPEPEARRSMFEEXXXXXXXXXXXXXXXMVERTEGYSGSDIRLVCKETAMQPLRRLMACL 181
           LPEPEAR +MFEE               +VERTEG+SGSDIRL+CKE AMQPLRR+M  L
Sbjct: 271 LPEPEARAAMFEELLPSQPDEEKLPYDLLVERTEGFSGSDIRLLCKEAAMQPLRRIMTLL 330

Query: 182 EKKHEVVPQDELPKVGPIRREDIEVALKNTRPSAHMHTPRYEKFNNDYGSQLL 340
           E   EVVP+DELPKVGPIR EDIE ALKNTRPSAH+H  RY+KFN DYGSQ+L
Sbjct: 331 EDTEEVVPEDELPKVGPIRPEDIETALKNTRPSAHLHAHRYDKFNADYGSQIL 383


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