BLASTX nr result
ID: Cnidium21_contig00046365
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00046365
(365 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFW73601.1| 30S ribosomal protein S19 [Zea mays] 123 7e-35
gb|ADD30221.1| ribosomal protein L2 [Aucuba japonica] gi|3408071... 148 5e-34
gb|ABU85181.1| ribosomal protein L2 [Anethum graveolens] 148 5e-34
ref|YP_087007.1| ribosomal protein L2 [Panax ginseng] gi|5222087... 147 1e-33
ref|NP_783272.1| ribosomal protein L2 [Atropa belladonna] gi|892... 147 1e-33
>gb|AFW73601.1| 30S ribosomal protein S19 [Zea mays]
Length = 246
Score = 123 bits (309), Expect(2) = 7e-35
Identities = 55/58 (94%), Positives = 56/58 (96%)
Frame = -1
Query: 365 AGSKRWLGKRPVVRGVVMNPVDHPHGGGEGKAPIGRKKPTTPWGYPALGRRSRKRNKY 192
AGSK WLGKRPVVRGVVMNPVDHPHGGGEGKAPIGRKKPTTPWGYPALGRR+RKR KY
Sbjct: 98 AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGKAPIGRKKPTTPWGYPALGRRTRKRKKY 155
Score = 48.9 bits (115), Expect(2) = 7e-35
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = -2
Query: 94 KKNPFVANRLLRKIDKLNTKAEKEIIITWSR 2
K NPFVA LL KI+K+N K EKEII+TWSR
Sbjct: 158 KTNPFVARHLLAKIEKVNMKEEKEIIVTWSR 188
>gb|ADD30221.1| ribosomal protein L2 [Aucuba japonica] gi|340807106|gb|AEK71707.1|
ribosomal protein L2 [Aucuba japonica]
Length = 274
Score = 148 bits (373), Expect = 5e-34
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -1
Query: 365 AGSKRWLGKRPVVRGVVMNPVDHPHGGGEGKAPIGRKKPTTPWGYPALGRRSRKRNKYSD 186
AGSKRWLGKRPVVRGVVMNPVDHPHGGGEGKAPIGRKKPTTPWGYPALGRRSRKRNKYSD
Sbjct: 206 AGSKRWLGKRPVVRGVVMNPVDHPHGGGEGKAPIGRKKPTTPWGYPALGRRSRKRNKYSD 265
Query: 185 NLILRRRS 162
NLILRRRS
Sbjct: 266 NLILRRRS 273
>gb|ABU85181.1| ribosomal protein L2 [Anethum graveolens]
Length = 274
Score = 148 bits (373), Expect = 5e-34
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = -1
Query: 365 AGSKRWLGKRPVVRGVVMNPVDHPHGGGEGKAPIGRKKPTTPWGYPALGRRSRKRNKYSD 186
AGSKRWLGKRPVVRGVVMNPVDHPHGGGEGKAPIGRKKPTTPWGYPALGRRSRKRNKYSD
Sbjct: 206 AGSKRWLGKRPVVRGVVMNPVDHPHGGGEGKAPIGRKKPTTPWGYPALGRRSRKRNKYSD 265
Query: 185 NLILRRRS 162
NLILRRRS
Sbjct: 266 NLILRRRS 273
>ref|YP_087007.1| ribosomal protein L2 [Panax ginseng] gi|52220876|ref|YP_087030.1|
ribosomal protein L2 [Panax ginseng]
gi|359422186|ref|YP_004935594.1| ribosomal protein L2
(chloroplast) [Eleutherococcus senticosus]
gi|359422207|ref|YP_004935617.1| ribosomal protein L2
(chloroplast) [Eleutherococcus senticosus]
gi|68052924|sp|Q68RU2.1|RK2_PANGI RecName: Full=50S
ribosomal protein L2, chloroplastic
gi|51235354|gb|AAT98550.1| ribosomal protein L2 [Panax
ginseng] gi|51235379|gb|AAT98575.1| ribosomal protein L2
[Panax ginseng] gi|347448249|gb|AEO92661.1| ribosomal
protein L2 (chloroplast) [Eleutherococcus senticosus]
gi|347448270|gb|AEO92682.1| ribosomal protein L2
(chloroplast) [Eleutherococcus senticosus]
Length = 274
Score = 147 bits (370), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = -1
Query: 365 AGSKRWLGKRPVVRGVVMNPVDHPHGGGEGKAPIGRKKPTTPWGYPALGRRSRKRNKYSD 186
AGSKRWLGKRPVVRGVVMNPVDHPHGGGEG+APIGRKKPTTPWGYPALGRRSRKRNKYSD
Sbjct: 206 AGSKRWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPTTPWGYPALGRRSRKRNKYSD 265
Query: 185 NLILRRRS 162
NLILRRRS
Sbjct: 266 NLILRRRS 273
>ref|NP_783272.1| ribosomal protein L2 [Atropa belladonna]
gi|89280676|ref|YP_514893.1| ribosomal protein L2
[Solanum lycopersicum] gi|89280700|ref|YP_514917.1|
ribosomal protein L2 [Solanum lycopersicum]
gi|91209029|ref|YP_538891.1| ribosomal protein L2
[Solanum bulbocastanum] gi|91209054|ref|YP_538914.1|
ribosomal protein L2 [Solanum bulbocastanum]
gi|108773170|ref|YP_635680.1| ribosomal protein L2
[Solanum tuberosum] gi|108773193|ref|YP_635703.1|
ribosomal protein L2 [Solanum tuberosum]
gi|42559493|sp|Q8S8V3.1|RK2A_ATRBE RecName: Full=50S
ribosomal protein L2-A, chloroplastic
gi|115510980|sp|Q2MI59.1|RK2_SOLLC RecName: Full=50S
ribosomal protein L2, chloroplastic
gi|115510982|sp|Q2MIE6.1|RK2_SOLBU RecName: Full=50S
ribosomal protein L2, chloroplastic
gi|115510983|sp|Q2VEB7.1|RK2_SOLTU RecName: Full=50S
ribosomal protein L2, chloroplastic
gi|20068372|emb|CAC88085.1| ribosomal protein L2 [Atropa
belladonna] gi|82754665|gb|ABB90079.1| ribosomal protein
L2 [Solanum tuberosum] gi|82754687|gb|ABB90101.1|
ribosomal protein L2 [Solanum tuberosum]
gi|84371936|gb|ABC56254.1| ribosomal protein L2 [Solanum
bulbocastanum] gi|84371961|gb|ABC56279.1| ribosomal
protein L2 [Solanum bulbocastanum]
gi|84372024|gb|ABC56341.1| ribosomal protein L2 [Solanum
lycopersicum] gi|84372049|gb|ABC56366.1| ribosomal
protein L2 [Solanum lycopersicum]
gi|88656844|gb|ABD47097.1| ribosomal protein L2 [Solanum
tuberosum] gi|88656868|gb|ABD47121.1| ribosomal protein
L2 [Solanum tuberosum] gi|89241712|emb|CAJ32435.1|
ribosomal protein L2 [Solanum lycopersicum]
gi|89241736|emb|CAJ32459.1| ribosomal protein L2
[Solanum lycopersicum] gi|329124623|gb|AEB72180.1|
ribosomal protein L2 (chloroplast) [Solanum tuberosum]
gi|329124646|gb|AEB72203.1| ribosomal protein L2
(chloroplast) [Solanum tuberosum]
gi|329124710|gb|AEB72266.1| ribosomal protein L2
(chloroplast) [Solanum tuberosum]
gi|329124733|gb|AEB72289.1| ribosomal protein L2
(chloroplast) [Solanum tuberosum]
Length = 274
Score = 147 bits (370), Expect = 1e-33
Identities = 67/68 (98%), Positives = 68/68 (100%)
Frame = -1
Query: 365 AGSKRWLGKRPVVRGVVMNPVDHPHGGGEGKAPIGRKKPTTPWGYPALGRRSRKRNKYSD 186
AGSKRWLGKRPVVRGVVMNPVDHPHGGGEG+APIGRKKPTTPWGYPALGRRSRKRNKYSD
Sbjct: 206 AGSKRWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPTTPWGYPALGRRSRKRNKYSD 265
Query: 185 NLILRRRS 162
NLILRRRS
Sbjct: 266 NLILRRRS 273