BLASTX nr result

ID: Cnidium21_contig00046354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046354
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318937.1| chromatin remodeling complex subunit [Populu...   106   2e-21
emb|CBI16338.3| unnamed protein product [Vitis vinifera]               96   2e-18
ref|XP_004139555.1| PREDICTED: uncharacterized protein LOC101222...    91   7e-17
dbj|BAG70995.1| uncharacterized protein [Musa balbisiana] gi|199...    75   4e-12
gb|AFW86279.1| hypothetical protein ZEAMMB73_952056 [Zea mays]         73   2e-11

>ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222857313|gb|EEE94860.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 2283

 Score =  106 bits (265), Expect = 2e-21
 Identities = 47/101 (46%), Positives = 68/101 (67%)
 Frame = -2

Query: 304 KTSSVFKRCAACSKRQRFCDGKECKTSCNLSCLNRSTDEAAAGVWHCFQCLNSKMQAAAC 125
           +T SV K CA  SKRQR CDG+ CK S +LSCL+    +   GVWHC  C+  K++    
Sbjct: 360 RTDSVAK-CATSSKRQRCCDGQGCKRSYHLSCLDPPLGDVPLGVWHCLACVRKKIEFGMH 418

Query: 124 LLPGSVEAIWNAREADVSDAKGLRKDKQYFVKYRGLAHIHN 2
            +   +E+IW+A E +V+D  G+++ KQ++VKY+GLAH+HN
Sbjct: 419 SVSKGIESIWDASEVEVADDNGVQRQKQFYVKYKGLAHVHN 459


>emb|CBI16338.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
 Frame = -2

Query: 304 KTSSVFKRCAACSKRQRF--CDGKECKTSCNLSCLNRSTDEAAAGVWHCFQCLNSKMQAA 131
           +T      C  C    +   CDGK CK S +L+CL+    E   G+WHC  C+  K +  
Sbjct: 439 QTGDDHNTCVVCKLGGKLLCCDGKGCKRSYHLACLDPPLGEIPPGIWHCMLCVKKKTELG 498

Query: 130 ACLLPGSVEAIWNAREADVSDAKGLRKDKQYFVKYRGLAHIHN 2
              +   VE+IW+ RE ++  A+G++K KQYFVKY+GLAH+HN
Sbjct: 499 VHAVSEGVESIWDTREVELPSAEGVQKQKQYFVKYKGLAHVHN 541


>ref|XP_004139555.1| PREDICTED: uncharacterized protein LOC101222705 [Cucumis sativus]
          Length = 2887

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 37/83 (44%), Positives = 55/83 (66%)
 Frame = -2

Query: 250 CDGKECKTSCNLSCLNRSTDEAAAGVWHCFQCLNSKMQAAACLLPGSVEAIWNAREADVS 71
           C+GKEC+ S +LSCL+   ++   GVWHC  C+  K++     +    E+IW+ RE ++S
Sbjct: 652 CEGKECRRSFHLSCLDPPLEDVPLGVWHCPMCIRRKIKFGVYAVSKGFESIWDTRETEIS 711

Query: 70  DAKGLRKDKQYFVKYRGLAHIHN 2
           DA G ++ KQYFVK++ LAH HN
Sbjct: 712 DADGSQRQKQYFVKFKDLAHAHN 734


>dbj|BAG70995.1| uncharacterized protein [Musa balbisiana]
           gi|199601726|dbj|BAG70985.1| uncharacterized protein
           [Musa balbisiana]
          Length = 405

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
 Frame = -2

Query: 280 CAACSKRQR--FCDGKECKTSCNLSCLNRSTDEAAAGVWHCFQCLNSKMQAAACLLPGSV 107
           C  C + +    CDGK C  S +LSCL+    +   GVW C  C+  K++     +   +
Sbjct: 166 CVVCRRPETDLSCDGKGCNRSYHLSCLDPPLQDTLPGVWLCIFCIKRKIEFGVYSVSEGI 225

Query: 106 EAIWNAREADVSDAKGLRKDKQYFVKYRGLAHIHN 2
           ++IWN +E       GL+  K+Y VKY+GLAH+HN
Sbjct: 226 DSIWNIKE-------GLQTGKRYLVKYKGLAHVHN 253


>gb|AFW86279.1| hypothetical protein ZEAMMB73_952056 [Zea mays]
          Length = 1990

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
 Frame = -2

Query: 280 CAACSKRQ-----RFCDGKECKTSCNLSCLNRSTDEAAAGVWHCFQCLNSKMQAAACLLP 116
           C  C  R+     + C GK CK   +LSC++ S D  + G+W C  C+  ++Q     + 
Sbjct: 69  CVVCRSREISDILKSCGGKGCKRHYHLSCMDPSLD-VSLGIWLCIMCMKKRIQFGVYSVS 127

Query: 115 GSVEAIWNAREADVSDAKGLRKDKQYFVKYRGLAHIHN 2
             +E++W+ +E       G+   KQYFVKY+ LAH+HN
Sbjct: 128 EGIESLWDVKE-------GVVNSKQYFVKYKNLAHVHN 158


Top