BLASTX nr result

ID: Cnidium21_contig00046336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046336
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530358.1| conserved hypothetical protein [Ricinus comm...    59   5e-07
ref|XP_002317716.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_002530358.1| conserved hypothetical protein [Ricinus communis]
           gi|223530105|gb|EEF32019.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 912

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 45/119 (37%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
 Frame = -3

Query: 346 APLLLSDDNSHNDSRKLGPLFFNPSPKTLTHITIXXXXXXXXXXXXXXXXXXXSRFIETS 167
           APLLLS   S +    LGPLFFNP+ KTLT +                     SRF+ TS
Sbjct: 19  APLLLSSPTSKSI---LGPLFFNPNRKTLTQL--YKSPSLFPPLLNPPPRLSLSRFLTTS 73

Query: 166 TN-SLILPSTSYSIASSTLGPQ---NNQTQLVHNALQMIKCSGSGRVLLFFPAGQNLDQ 2
           T     +P ++ S  +S LG Q   N+ + L HN LQ + C     V++FF  G N DQ
Sbjct: 74  TTFDSPIPLSTASSITSRLGSQFHDNSASLLAHNQLQFLNCPHDNSVIVFFSTGCNHDQ 132


>ref|XP_002317716.1| predicted protein [Populus trichocarpa] gi|222858389|gb|EEE95936.1|
           predicted protein [Populus trichocarpa]
          Length = 906

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
 Frame = -3

Query: 346 APLLLSDDNSHNDSRKLGPLFFNPSPKTLTHITIXXXXXXXXXXXXXXXXXXXSRFIETS 167
           APLLLS   S +    +GPL FNP P++L H+                     +RFI TS
Sbjct: 22  APLLLSKQTSES---LIGPLVFNPIPESLAHL--FTSPALSPPLLNPPPHLSLTRFISTS 76

Query: 166 T--NSLILPSTSYSIASSTLGPQN---NQTQLVHNALQMIKCSGSGRVLLFFPAGQNLDQ 2
           T  +S +  ST+ SIA S  GPQ+   +   L +N LQ +KC     V++FF  G NLD+
Sbjct: 77  TLADSPLPLSTASSIAFS-FGPQDLHFSSPLLAYNRLQFLKCPHDDTVVVFFSTGTNLDR 135


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