BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046295
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]    64   2e-08
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...    59   4e-07
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    57   2e-06
gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]             57   2e-06
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...    57   2e-06

>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 50/154 (32%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
 Frame = -3

Query: 456  THVPAPVVEPTVESTDTTSAFVDLWEGMPHDIDTLVNLHPETNVSLSTSEHFFFQKSTRD 277
            T VP P+   +V S   +S         P      V L P    + S +     ++STR 
Sbjct: 1107 TDVPEPLSHESVASPLPSSPSPSSLSSPPS-----VPLVPSNTSAPSPTHEPPLRRSTRH 1161

Query: 276  KQRSHW*KDYHFSH--NPGATRNADVNSVVKYPMANFVSTTSFSTEHNALLAHIVKHKEP 103
             Q   W  DY  S   N  +T+++      +YP+++ +S   FS  H A LA +    EP
Sbjct: 1162 IQPPAWHHDYVMSAQLNHSSTQSSSRQGT-RYPLSSHLSFFRFSPHHRAFLALLTAQTEP 1220

Query: 102  KSFAQAVIYPKLIGAMNKESDALENSNTWELVYL 1
             SF QA   P+   AM+ E  ALE +NTWE+V L
Sbjct: 1221 SSFEQADCDPRWRQAMSTELQALERNNTWEMVPL 1254


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
 Frame = -3

Query: 375  MPHDIDTLVN-LHPETNVSLSTSEHFFFQKSTRDKQRSHW*KDYHFSHNPGATRNADVNS 199
            +P D+  LV+ +H       STSE      S R+ +   + +DY  +  P  T++     
Sbjct: 875  IPRDVFDLVDPVHENIENPPSTSESAPKVSSKRESRPPGYLQDYFCNAVPDVTKD----- 929

Query: 198  VVKYPMANFVSTTSFSTEHNALLAHIVKHKEPKSFAQAVIYPKLIGAMNKESDALENSNT 19
             V+YP+  +++ T  S E  A +  + K+ EP ++AQA    + + AM  E DALE++NT
Sbjct: 930  -VRYPLNAYINYTQLSEEFTAYICAVNKYPEPCTYAQAKKIKEWLDAMEIEIDALESTNT 988

Query: 18   WELVYL 1
            W +  L
Sbjct: 989  WSVCSL 994


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/63 (46%), Positives = 41/63 (65%)
 Frame = -3

Query: 189 YPMANFVSTTSFSTEHNALLAHIVKHKEPKSFAQAVIYPKLIGAMNKESDALENSNTWEL 10
           YP+AN+V+ T FS  H A LA I   KEP+++ +AV   +   AM KE +ALE + TW++
Sbjct: 779 YPIANYVTYTKFSVGHRAFLAXINIEKEPRTYKEAVXDNRWREAMAKEIEALETNQTWKV 838

Query: 9   VYL 1
           V L
Sbjct: 839 VDL 841


>gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
          Length = 1428

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
 Frame = -3

Query: 339  PETNVSLSTSEHF-------FFQKSTRDKQRSHW*KDYHFSHNPGATRNADVNSVVKYPM 181
            P T   +S + H        + ++S+R+ +   W KDY  +    +T         K+PM
Sbjct: 848  PSTTEEVSENTHAIPSHVDSYVRRSSRNIKEPMWMKDYTITKGHSST---------KHPM 898

Query: 180  ANFVSTTSFSTEHNALLAHIVKHKEPKSFAQAVIYPKLIGAMNKESDALENSNTWELVYL 1
            A++++      E  + L+ + ++ EPK+F QA    + I AM +E  ALE +NTW++V L
Sbjct: 899  ASYLNYEKLKPECRSFLSKLSEYTEPKNFKQASQDERWIQAMKQEIKALEENNTWQVVEL 958


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 21/118 (17%)
 Frame = -3

Query: 291  KSTRDKQRSHW*KDY------------HFSHNPG--------ATRNAD-VNSVVKYPMAN 175
            K  R+K++S   KD+            H  H+P          + +AD V+    YP+++
Sbjct: 904  KGCREKKKSVLLKDFVTNTTSKKKTASHNIHSPSQVLPSGLPTSLSADSVSGKTLYPLSD 963

Query: 174  FVSTTSFSTEHNALLAHIVKHKEPKSFAQAVIYPKLIGAMNKESDALENSNTWELVYL 1
            F++ + +S  H A +A I+   EPK F  A++  +   AM+KE DALE ++TW++  L
Sbjct: 964  FLTNSGYSANHIAFMAAILDSNEPKHFKDAILIKEWCEAMSKEIDALEANHTWDITDL 1021