BLASTX nr result

ID: Cnidium21_contig00046272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046272
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144780.1| PREDICTED: ATP-dependent Clp protease proteo...   139   3e-31
ref|NP_001241928.1| uncharacterized protein LOC100809485 [Glycin...   139   3e-31
gb|AAB70396.1| Similar to ATP-dependent Clp protease (gb|D90915)...   136   2e-30
dbj|BAD43698.1| ClpP protease complex subunit ClpR3 [Arabidopsis...   136   2e-30
dbj|BAD44446.1| ClpP protease complex subunit ClpR3 [Arabidopsis...   136   2e-30

>ref|XP_004144780.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
           protein 3, chloroplastic-like [Cucumis sativus]
           gi|449490882|ref|XP_004158737.1| PREDICTED:
           ATP-dependent Clp protease proteolytic subunit-related
           protein 3, chloroplastic-like [Cucumis sativus]
          Length = 331

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/90 (71%), Positives = 74/90 (82%)
 Frame = -1

Query: 271 H*NYSFNPCAALNTKNNAKIPLPPINPNDPFLSKLASVAANSPEKLLNRPTNSDTPPFLD 92
           H   +F   + LN  +NAK+PLPPINP DPFLSKLASVA+ SPE LLNRP NS++PP+LD
Sbjct: 29  HRAINFRTVSCLNATSNAKVPLPPINPKDPFLSKLASVASTSPETLLNRPANSESPPYLD 88

Query: 91  IFDSPTLMATPAQVERSVSYNEHRPRRPPP 2
           IFD+P LMA PAQVERS+SYNEHR RRPPP
Sbjct: 89  IFDAPRLMAAPAQVERSISYNEHRSRRPPP 118


>ref|NP_001241928.1| uncharacterized protein LOC100809485 [Glycine max]
           gi|255635968|gb|ACU18330.1| unknown [Glycine max]
          Length = 324

 Score =  139 bits (349), Expect = 3e-31
 Identities = 67/85 (78%), Positives = 72/85 (84%), Gaps = 3/85 (3%)
 Frame = -1

Query: 247 CAALNTK---NNAKIPLPPINPNDPFLSKLASVAANSPEKLLNRPTNSDTPPFLDIFDSP 77
           C  L T    N AKIP+PP+NP DPFLSKLAS+AA+SP+ LLN P NSDTPPFLDIFDSP
Sbjct: 28  CRNLKTSCSVNAAKIPMPPLNPKDPFLSKLASIAASSPDTLLNTPKNSDTPPFLDIFDSP 87

Query: 76  TLMATPAQVERSVSYNEHRPRRPPP 2
            LMATPAQVERSVSYNEHRPRRPPP
Sbjct: 88  KLMATPAQVERSVSYNEHRPRRPPP 112


>gb|AAB70396.1| Similar to ATP-dependent Clp protease (gb|D90915). EST gb|N65461
           comes from this gene [Arabidopsis thaliana]
          Length = 292

 Score =  136 bits (342), Expect = 2e-30
 Identities = 62/80 (77%), Positives = 70/80 (87%)
 Frame = -1

Query: 241 ALNTKNNAKIPLPPINPNDPFLSKLASVAANSPEKLLNRPTNSDTPPFLDIFDSPTLMAT 62
           A   K +AKIP+PPINP DPFLS LAS+AANSPEKLLNRP N+D PP+LDIFDSP LM++
Sbjct: 41  AFRAKASAKIPMPPINPKDPFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSS 100

Query: 61  PAQVERSVSYNEHRPRRPPP 2
           PAQVERSV+YNEHRPR PPP
Sbjct: 101 PAQVERSVAYNEHRPRTPPP 120


>dbj|BAD43698.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
          Length = 315

 Score =  136 bits (342), Expect = 2e-30
 Identities = 62/80 (77%), Positives = 70/80 (87%)
 Frame = -1

Query: 241 ALNTKNNAKIPLPPINPNDPFLSKLASVAANSPEKLLNRPTNSDTPPFLDIFDSPTLMAT 62
           A   K +AKIP+PPINP DPFLS LAS+AANSPEKLLNRP N+D PP+LDIFDSP LM++
Sbjct: 26  AFRAKASAKIPMPPINPKDPFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSS 85

Query: 61  PAQVERSVSYNEHRPRRPPP 2
           PAQVERSV+YNEHRPR PPP
Sbjct: 86  PAQVERSVAYNEHRPRTPPP 105


>dbj|BAD44446.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
          Length = 330

 Score =  136 bits (342), Expect = 2e-30
 Identities = 62/80 (77%), Positives = 70/80 (87%)
 Frame = -1

Query: 241 ALNTKNNAKIPLPPINPNDPFLSKLASVAANSPEKLLNRPTNSDTPPFLDIFDSPTLMAT 62
           A   K +AKIP+PPINP DPFLS LAS+AANSPEKLLNRP N+D PP+LDIFDSP LM++
Sbjct: 41  AFRAKASAKIPMPPINPKDPFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSS 100

Query: 61  PAQVERSVSYNEHRPRRPPP 2
           PAQVERSV+YNEHRPR PPP
Sbjct: 101 PAQVERSVAYNEHRPRTPPP 120


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