BLASTX nr result

ID: Cnidium21_contig00046243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046243
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283658.2| PREDICTED: uncharacterized protein LOC100263...   160   1e-37
emb|CBI16537.3| unnamed protein product [Vitis vinifera]              160   1e-37
emb|CAN78881.1| hypothetical protein VITISV_024992 [Vitis vinifera]   148   5e-34
ref|XP_002304854.1| predicted protein [Populus trichocarpa] gi|2...   146   1e-33
ref|XP_004159367.1| PREDICTED: mediator of RNA polymerase II tra...   139   2e-31

>ref|XP_002283658.2| PREDICTED: uncharacterized protein LOC100263945 [Vitis vinifera]
          Length = 1932

 Score =  160 bits (405), Expect = 1e-37
 Identities = 75/110 (68%), Positives = 91/110 (82%)
 Frame = +2

Query: 2   GDVFSRYHPFSQSEELFRRGQLVVEFVFAASEEAVFVHVVVSAKHIRTITSGDMETILER 181
           GDVFS+YHPFSQSEELFRRGQ  +EF+FAA+EEA+FVHV++SAKH+R + SGDME +L+ 
Sbjct: 149 GDVFSKYHPFSQSEELFRRGQPTIEFIFAATEEAIFVHVIISAKHVRALASGDMEMVLKH 208

Query: 182 SSSLSRNGIPVIVSPHGMHGKLTGCCPGDLVQQVYTSSGKLKSSNGIIGL 331
           SS+     +PVIVSPHGM G+ TGCCP DLV+QVY S  K K+SNG IGL
Sbjct: 209 SSNKYSESLPVIVSPHGMLGRFTGCCPSDLVKQVYFS--KFKTSNGFIGL 256


>emb|CBI16537.3| unnamed protein product [Vitis vinifera]
          Length = 1812

 Score =  160 bits (405), Expect = 1e-37
 Identities = 75/110 (68%), Positives = 91/110 (82%)
 Frame = +2

Query: 2   GDVFSRYHPFSQSEELFRRGQLVVEFVFAASEEAVFVHVVVSAKHIRTITSGDMETILER 181
           GDVFS+YHPFSQSEELFRRGQ  +EF+FAA+EEA+FVHV++SAKH+R + SGDME +L+ 
Sbjct: 149 GDVFSKYHPFSQSEELFRRGQPTIEFIFAATEEAIFVHVIISAKHVRALASGDMEMVLKH 208

Query: 182 SSSLSRNGIPVIVSPHGMHGKLTGCCPGDLVQQVYTSSGKLKSSNGIIGL 331
           SS+     +PVIVSPHGM G+ TGCCP DLV+QVY S  K K+SNG IGL
Sbjct: 209 SSNKYSESLPVIVSPHGMLGRFTGCCPSDLVKQVYFS--KFKTSNGFIGL 256


>emb|CAN78881.1| hypothetical protein VITISV_024992 [Vitis vinifera]
          Length = 1154

 Score =  148 bits (373), Expect = 5e-34
 Identities = 75/131 (57%), Positives = 91/131 (69%), Gaps = 21/131 (16%)
 Frame = +2

Query: 2   GDVFSRYHPFSQSEELFRR---------------------GQLVVEFVFAASEEAVFVHV 118
           GDVFS+YHPFSQSEELFRR                     GQ  +EF+FAA+EEA+FVHV
Sbjct: 143 GDVFSKYHPFSQSEELFRRINLRLEKIQRDFLWGSRAGRRGQPTIEFIFAATEEAIFVHV 202

Query: 119 VVSAKHIRTITSGDMETILERSSSLSRNGIPVIVSPHGMHGKLTGCCPGDLVQQVYTSSG 298
           ++SAKH+R + SGDME +L+ SS+     +PVIVSPHGM G+ TGCCP DLV+QVY S  
Sbjct: 203 IISAKHVRALASGDMEMVLKHSSNKYSESLPVIVSPHGMLGRFTGCCPSDLVKQVYFS-- 260

Query: 299 KLKSSNGIIGL 331
           K K+SNG IGL
Sbjct: 261 KFKTSNGFIGL 271


>ref|XP_002304854.1| predicted protein [Populus trichocarpa] gi|222842286|gb|EEE79833.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  146 bits (369), Expect = 1e-33
 Identities = 69/110 (62%), Positives = 90/110 (81%)
 Frame = +2

Query: 2   GDVFSRYHPFSQSEELFRRGQLVVEFVFAASEEAVFVHVVVSAKHIRTITSGDMETILER 181
           GDVF +YHP SQSE L R+G+  VEF+F+ASEEA+FVH ++SAKHIR +++GD+E +L++
Sbjct: 132 GDVFLKYHP-SQSEGLSRKGRPTVEFIFSASEEAIFVHAIISAKHIRALSNGDVERVLKQ 190

Query: 182 SSSLSRNGIPVIVSPHGMHGKLTGCCPGDLVQQVYTSSGKLKSSNGIIGL 331
           SSS S   +PVI SPHG+ G LTGCCP DLV+QV+ SSGK K+SNG IG+
Sbjct: 191 SSSNSSYRLPVIASPHGIRGSLTGCCPNDLVKQVFMSSGKSKTSNGFIGM 240


>ref|XP_004159367.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           13-like [Cucumis sativus]
          Length = 1925

 Score =  139 bits (351), Expect = 2e-31
 Identities = 64/110 (58%), Positives = 90/110 (81%)
 Frame = +2

Query: 2   GDVFSRYHPFSQSEELFRRGQLVVEFVFAASEEAVFVHVVVSAKHIRTITSGDMETILER 181
           GDVF++YH   QSEELFRRGQ  +EF+FAA+EEA+FVHV++SAKHIR ++S ++E +L+ 
Sbjct: 149 GDVFTKYHHM-QSEELFRRGQPTMEFIFAATEEAIFVHVILSAKHIRALSSAEIERVLKN 207

Query: 182 SSSLSRNGIPVIVSPHGMHGKLTGCCPGDLVQQVYTSSGKLKSSNGIIGL 331
           S+  S  G+PVIVSPHG+ G+ TGCC  D+V+++Y+SSGK ++S G +GL
Sbjct: 208 SAHNSCLGLPVIVSPHGIRGRFTGCCASDVVKRIYSSSGKSRTSYGFVGL 257


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