BLASTX nr result

ID: Cnidium21_contig00046232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046232
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78184.1| hypothetical protein VITISV_031283 [Vitis vinifera]   100   1e-19
ref|XP_002468245.1| hypothetical protein SORBIDRAFT_01g042400 [S...    96   2e-18
ref|XP_002322438.1| type-b response regulator [Populus trichocar...    96   2e-18
tpg|DAA44151.1| TPA: putative two-component response regulator f...    96   3e-18
ref|NP_001104861.1| response regulator 8 [Zea mays] gi|13661174|...    96   3e-18

>emb|CAN78184.1| hypothetical protein VITISV_031283 [Vitis vinifera]
          Length = 609

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/127 (40%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
 Frame = +3

Query: 6   LEKWNIYEVTTAKHAQEALTMLKIKS--YDLIVLDIHMPDMNGLELLKQINQEFHLPVIL 179
           L+ W  YEV T   AQ+ALT L+ +S  + LIV D+HMP+M+G E  + +++EFHLPV++
Sbjct: 40  LKTWK-YEVVTVNSAQDALTTLRTRSNFFHLIVTDVHMPEMDGFEFQRLVHEEFHLPVVM 98

Query: 180 ISADSSAELMCMGIKNGAQCFLVKPIEANDLKDIWQYSVWWNATKNN---SSSESSQGGV 350
           +SAD     M  G++ GA  ++VKP+  +DLK++WQY+V     K++      E +QG  
Sbjct: 99  MSADDKESSMLRGLEAGAAFYIVKPVNYDDLKNLWQYAVGXKKGKSHIVMQEIERTQGAS 158

Query: 351 EMADHNN 371
            +   +N
Sbjct: 159 XLEKTSN 165


>ref|XP_002468245.1| hypothetical protein SORBIDRAFT_01g042400 [Sorghum bicolor]
           gi|241922099|gb|EER95243.1| hypothetical protein
           SORBIDRAFT_01g042400 [Sorghum bicolor]
          Length = 686

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/117 (41%), Positives = 74/117 (63%), Gaps = 2/117 (1%)
 Frame = +3

Query: 24  YEVTTAKHAQEALTMLKI--KSYDLIVLDIHMPDMNGLELLKQINQEFHLPVILISADSS 197
           Y+VTT   A  ALTML+   + +D+I+ D+HMPDM+G  LL+ +  E  LPVI++SADS 
Sbjct: 39  YDVTTCPQATRALTMLRENRRGFDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSR 98

Query: 198 AELMCMGIKNGAQCFLVKPIEANDLKDIWQYSVWWNATKNNSSSESSQGGVEMADHN 368
            +++  GIK+GA  +L+KP+   +LK+IWQ+ V     +N     S  G ++  D N
Sbjct: 99  TDIVMKGIKHGACDYLIKPVRMEELKNIWQHVVRKKFNENKDHEHS--GSLDDTDRN 153


>ref|XP_002322438.1| type-b response regulator [Populus trichocarpa]
           gi|222869434|gb|EEF06565.1| type-b response regulator
           [Populus trichocarpa]
          Length = 716

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/104 (45%), Positives = 75/104 (72%), Gaps = 2/104 (1%)
 Frame = +3

Query: 30  VTTAKHAQEALTMLKIKS--YDLIVLDIHMPDMNGLELLKQINQEFHLPVILISADSSAE 203
           V T K+  +AL+ L++K   +DL+V D+HMP+MNG+EL +Q+++EF LPVI++S+D S +
Sbjct: 52  VVTVKNPFDALSTLRLKKGLFDLVVTDLHMPEMNGMELQQQVDEEFKLPVIIMSSDDSEK 111

Query: 204 LMCMGIKNGAQCFLVKPIEANDLKDIWQYSVWWNATKNNSSSES 335
           ++   ++ GA  ++VKPI  +DLK++WQY+V   ATK    S S
Sbjct: 112 VILRTLEGGAAFYIVKPINKDDLKNVWQYAV---ATKTGKYSLS 152


>tpg|DAA44151.1| TPA: putative two-component response regulator family protein
           isoform 1 [Zea mays] gi|414865595|tpg|DAA44152.1| TPA:
           putative two-component response regulator family protein
           isoform 2 [Zea mays] gi|414865596|tpg|DAA44153.1| TPA:
           putative two-component response regulator family protein
           isoform 3 [Zea mays]
          Length = 684

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/117 (41%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
 Frame = +3

Query: 24  YEVTTAKHAQEALTMLKI--KSYDLIVLDIHMPDMNGLELLKQINQEFHLPVILISADSS 197
           Y+VTT   A  ALTML+   + +D+I+ D+HMPDM+G  LL+ +  E  LPVI++SADS 
Sbjct: 39  YDVTTCPQATRALTMLRENRRGFDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSR 98

Query: 198 AELMCMGIKNGAQCFLVKPIEANDLKDIWQYSVWWNATKNNSSSESSQGGVEMADHN 368
            +++  GIK+GA  +L+KP+   +LK+IWQ+ V      N +      G ++  D N
Sbjct: 99  TDIVMKGIKHGACDYLIKPVRMEELKNIWQHVV--RKKFNGNKDHEHSGSLDDTDRN 153


>ref|NP_001104861.1| response regulator 8 [Zea mays] gi|13661174|dbj|BAB41137.1|
           response regulator 8 [Zea mays]
           gi|195656391|gb|ACG47663.1| two-component response
           regulator ARR1 [Zea mays]
          Length = 684

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/117 (41%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
 Frame = +3

Query: 24  YEVTTAKHAQEALTMLKI--KSYDLIVLDIHMPDMNGLELLKQINQEFHLPVILISADSS 197
           Y+VTT   A  ALTML+   + +D+I+ D+HMPDM+G  LL+ +  E  LPVI++SADS 
Sbjct: 39  YDVTTCPQATRALTMLRENRRGFDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSR 98

Query: 198 AELMCMGIKNGAQCFLVKPIEANDLKDIWQYSVWWNATKNNSSSESSQGGVEMADHN 368
            +++  GIK+GA  +L+KP+   +LK+IWQ+ V      N +      G ++  D N
Sbjct: 99  TDIVMKGIKHGACDYLIKPVRMEELKNIWQHVV--RKKFNGNKDHEHSGSLDDTDRN 153


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