BLASTX nr result

ID: Cnidium21_contig00046231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046231
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK54302.1|AC034258_20 putative helicase [Oryza sativa Japoni...    84   2e-14
ref|NP_001043325.1| Os01g0556600 [Oryza sativa Japonica Group] g...    78   7e-13
gb|AAK54292.1|AC034258_10 putative helicase [Oryza sativa Japoni...    78   9e-13
gb|ABB47755.2| expressed protein [Oryza sativa Japonica Group]         78   9e-13
gb|AFW61004.1| hypothetical protein ZEAMMB73_411669 [Zea mays]         77   1e-12

>gb|AAK54302.1|AC034258_20 putative helicase [Oryza sativa Japonica Group]
           gi|31432486|gb|AAP54108.1| AT hook motif-containing
           protein, putative [Oryza sativa Japonica Group]
          Length = 1573

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/87 (48%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
 Frame = -3

Query: 263 NIPKFCQLYVYDTENEIENRMKAI---PRSDHIDPDIVEGLLTMLDQNNKLVKQFRTARD 93
           N P+F QLY+YDTENEI+NR++A     R+  +D   + GLLTMLD+NN L + FR AR+
Sbjct: 288 NKPRFQQLYIYDTENEIKNRIEASRSGTRNASLDEKTIAGLLTMLDENNTLAQTFRMARE 347

Query: 92  RFKLDEQEEFQLVLLSSKSVSGRPNHV 12
           RFK D+   + L LL ++   GR N++
Sbjct: 348 RFKEDDYHNYTLRLLDNRDQDGRQNNM 374


>ref|NP_001043325.1| Os01g0556600 [Oryza sativa Japonica Group]
           gi|113532856|dbj|BAF05239.1| Os01g0556600 [Oryza sativa
           Japonica Group]
          Length = 1932

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 46/100 (46%), Positives = 56/100 (56%), Gaps = 16/100 (16%)
 Frame = -3

Query: 257 PKFCQLYVYDTENEIENRMKAIPR---SDHIDPDIVEGLLTMLDQNNKLVKQFRTARDRF 87
           PKF QLY+YDTENE  NRM    +   SD  DPDIV GL +MLD++N LVK FR ARDR 
Sbjct: 382 PKFAQLYIYDTENETANRMNIYEKDNPSDEPDPDIVNGLSSMLDEHNDLVKAFRFARDRL 441

Query: 86  K-------------LDEQEEFQLVLLSSKSVSGRPNHVAP 6
           K              D ++E Q  L +S  ++G     AP
Sbjct: 442 KDNGDQKIALRLLGCDSRDEIQYNLPTSGDIAGNIEFSAP 481


>gb|AAK54292.1|AC034258_10 putative helicase [Oryza sativa Japonica Group]
          Length = 1501

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
 Frame = -3

Query: 263 NIPKFCQLYVYDTENEIENRMKAIPRSDH---IDPDIVEGLLTMLDQNNKLVKQFRTARD 93
           N P+F QLYVYDTENEIENR++A         +D   +  LL MLD+NN L + FR ARD
Sbjct: 273 NKPRFQQLYVYDTENEIENRIEASKSGASNAPLDQKTIASLLKMLDENNTLAQTFRMARD 332

Query: 92  RFKLDEQEEFQLVLLSSKSVSGRPNHV 12
           RFK D+   + L LL ++   GR +++
Sbjct: 333 RFKEDDYHNYTLRLLDNRDQDGRQDNM 359


>gb|ABB47755.2| expressed protein [Oryza sativa Japonica Group]
          Length = 1517

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
 Frame = -3

Query: 263 NIPKFCQLYVYDTENEIENRMKAIPRSDH---IDPDIVEGLLTMLDQNNKLVKQFRTARD 93
           N P+F QLYVYDTENEIENR++A         +D   +  LL MLD+NN L + FR ARD
Sbjct: 273 NKPRFQQLYVYDTENEIENRIEASKSGASNAPLDQKTIASLLKMLDENNTLAQTFRMARD 332

Query: 92  RFKLDEQEEFQLVLLSSKSVSGRPNHV 12
           RFK D+   + L LL ++   GR +++
Sbjct: 333 RFKEDDYHNYTLRLLDNRDQDGRQDNM 359


>gb|AFW61004.1| hypothetical protein ZEAMMB73_411669 [Zea mays]
          Length = 769

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/77 (49%), Positives = 52/77 (67%), Gaps = 4/77 (5%)
 Frame = -3

Query: 257 PKFCQLYVYDTENEIENRMKAIPRSDH----IDPDIVEGLLTMLDQNNKLVKQFRTARDR 90
           PKF QLY+YDT NEI+NRM ++  +D     +DP IV GL+ MLD +N   K+FR ARDR
Sbjct: 165 PKFIQLYIYDTANEIQNRMNSLGNNDRNDGGLDPVIVNGLIKMLDDHNPFAKKFRMARDR 224

Query: 89  FKLDEQEEFQLVLLSSK 39
              +E E+F + L+ +K
Sbjct: 225 LADNESEDFIIRLIGAK 241


Top