BLASTX nr result

ID: Cnidium21_contig00046215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046215
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-...    62   6e-08
emb|CBI39750.3| unnamed protein product [Vitis vinifera]               62   6e-08
emb|CAN67146.1| hypothetical protein VITISV_042361 [Vitis vinifera]    62   6e-08

>ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Vitis vinifera]
          Length = 4116

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
 Frame = -3

Query: 381 ETASDTLSVSNIIKKYFNSHDEVT-----SNLEINSGTIGTFS-QQMKATTYDGCSNITI 220
           E +S+ +SVS II++YF++ D +      S+ E+NS  I ++S +Q++ TT    S+I I
Sbjct: 231 ERSSEVVSVSGIIERYFSNFDGMNHFGSPSSSEVNSRVISSWSNEQLRVTTDGNHSDIQI 290

Query: 219 NATPHWIASTPRRVTVSPYCTQXXXXXXXXXXXXXKPGNYIVLAFSKLGIGASKQNTNAS 40
             TP     TP R T     T              + G  +V+A + LGI +SKQ    S
Sbjct: 291 GTTPLLTTKTPARETPFSLSTNSRPGTSRDKLEITEVGKRLVMASNTLGISSSKQRPAIS 350

Query: 39  ICRLRQKKL 13
           I R +  KL
Sbjct: 351 ISRFKDGKL 359


>emb|CBI39750.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
 Frame = -3

Query: 381 ETASDTLSVSNIIKKYFNSHDEVT-----SNLEINSGTIGTFS-QQMKATTYDGCSNITI 220
           E +S+ +SVS II++YF++ D +      S+ E+NS  I ++S +Q++ TT    S+I I
Sbjct: 231 ERSSEVVSVSGIIERYFSNFDGMNHFGSPSSSEVNSRVISSWSNEQLRVTTDGNHSDIQI 290

Query: 219 NATPHWIASTPRRVTVSPYCTQXXXXXXXXXXXXXKPGNYIVLAFSKLGIGASKQNTNAS 40
             TP     TP R T     T              + G  +V+A + LGI +SKQ    S
Sbjct: 291 GTTPLLTTKTPARETPFSLSTNSRPGTSRDKLEITEVGKRLVMASNTLGISSSKQRPAIS 350

Query: 39  ICRLRQKKL 13
           I R +  KL
Sbjct: 351 ISRFKDGKL 359


>emb|CAN67146.1| hypothetical protein VITISV_042361 [Vitis vinifera]
          Length = 413

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
 Frame = -3

Query: 381 ETASDTLSVSNIIKKYFNSHDEVT-----SNLEINSGTIGTFS-QQMKATTYDGCSNITI 220
           E +S+ +SVS II++YF++ D +      S+ E+NS  I ++S +Q++ TT    S+I I
Sbjct: 265 ERSSEVVSVSGIIERYFSNFDGMNHFGSPSSSEVNSRVISSWSNEQLRVTTDGNHSDIQI 324

Query: 219 NATPHWIASTPRRVTVSPYCTQXXXXXXXXXXXXXKPGNYIVLAFSKLGIGASKQNTNAS 40
             TP     TP R T     T              + G  +V+A + LGI +SKQ    S
Sbjct: 325 GTTPLLTTKTPARETPFSLSTNSRPGTSRDKLEITEVGKRLVMASNTLGISSSKQRPAIS 384

Query: 39  ICRLRQKKL 13
           I R +  KL
Sbjct: 385 ISRFKDGKL 393


Top