BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046202
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211...   114   8e-24
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...    99   3e-19
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...    99   4e-19
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...    98   8e-19
emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]    97   1e-18

>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
          Length = 2085

 Score =  114 bits (285), Expect = 8e-24
 Identities = 63/160 (39%), Positives = 99/160 (61%), Gaps = 2/160 (1%)
 Frame = -3

Query: 476  VSHVGTIQLASDIVLKNVLVVPTFQYNLLSVAQLTHDTSSTVSFTPSKCQLQDSLLKRGG 297
            V H+G + +++D+VLK+VL +P F+YNLLSV+ L  D    +SF  S C +QD  L +  
Sbjct: 1702 VEHIGDVFISNDLVLKDVLYIPDFKYNLLSVSTLLKDDKFAISFADSNCLIQDKWLLKTI 1761

Query: 296  EIGDLCDGLYKLSTVKLNSTHIISPTALQSSHTESSIVKWHRRFGHPSLNVLKPIS-TID 120
               +L +GLY L  +K    + I  TAL    + S    WH+R GHPS++ +K ++  I+
Sbjct: 1762 GKAELTNGLY-LLRMKNEKVNCIQHTALMCKVSAS---MWHKRMGHPSISRIKELAKMIE 1817

Query: 119  LS-FKSVLPDCEICHLAKQVRLPFPVRNSVSTDLFEIINC 3
            +S F +    C IC LAKQ RL FP+ N+++ ++F++I+C
Sbjct: 1818 ISDFPNCKEVCHICPLAKQRRLSFPILNNIAENIFDLIHC 1857



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/64 (42%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
 Frame = -3

Query: 179 WHRRFGHPSLNVLKPIST-IDLSFKSVLPDCE----ICHLAKQVRLPFPVRNSVSTDLFE 15
           WH+R GHPS++ +K ++  I++S     P+C+    IC LAKQ RL FP+ N+++ ++FE
Sbjct: 372 WHKRMGHPSISRIKELAKMIEISD---FPNCKEVYHICPLAKQRRLSFPILNNIAENVFE 428

Query: 14  IINC 3
           +I+C
Sbjct: 429 LIHC 432


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 63/171 (36%), Positives = 93/171 (54%), Gaps = 7/171 (4%)
 Frame = -3

Query: 497 PNGQT*YVSHVGTIQLASDIVLKNVLVVPTFQYNLLSVAQLTHDTSSTVSFTPSKCQLQD 318
           P G    +S VGT+ +  DI+L+NVL +P F+ NL+S++ LT D  + V F PS CQ+QD
Sbjct: 473 PTGPNVRISGVGTVLINKDIILQNVLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQD 532

Query: 317 SLLKRGGEIGD--LCDGLYKLSTVKLNSTHIISPTALQSSHTESSIVKWHRRFGHPSLNV 144
             L +G  +G+      LY L T         SP    ++  + S+  WH+R GHPS + 
Sbjct: 533 --LTKGLTLGEGKRIGNLYVLDTQ--------SPAISVNAVVDVSV--WHKRLGHPSFSR 580

Query: 143 LKPIS-----TIDLSFKSVLPDCEICHLAKQVRLPFPVRNSVSTDLFEIIN 6
           L  +S     T   + KS    C +CHLAKQ +L FP  N++    FE+++
Sbjct: 581 LDSLSEVLGTTRHKNKKSAY--CHVCHLAKQKKLSFPSANNICNSTFELLH 629


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 65/172 (37%), Positives = 90/172 (52%), Gaps = 3/172 (1%)
 Frame = -3

Query: 512 SELHPPNGQT*YVSHVGTIQLASDIVLKNVLVVPTFQYNLLSVAQLTHDTSSTVSFTPSK 333
           S ++ P G T  +S VGT++L  DI+LKNVL +P F+ NL+S++ LT D  S V F  + 
Sbjct: 457 SAVNLPTGPTVKISGVGTLKLNDDILLKNVLFIPEFRLNLISISSLTDDIGSRVIFDKNS 516

Query: 332 CQLQDSLLKRGGEIGDLCDGLYKLSTVKLNSTHIISPTALQSSHTESSIVKWHRRFGHPS 153
           C++QD +  R    G     LY L          IS  A+        I  WHRR GH S
Sbjct: 517 CEIQDLIKGRMLGQGRRVANLYLLDV----GDQSISVNAV------VDISMWHRRLGHAS 566

Query: 152 LNVLKPISTI--DLSFKSVLPD-CEICHLAKQVRLPFPVRNSVSTDLFEIIN 6
           L  L  IS        K+   D C +CHLAKQ +L FP  N V  ++F++++
Sbjct: 567 LQRLDAISDSLGTTRHKNKGSDFCHVCHLAKQRKLSFPTSNKVCKEIFDLLH 618


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 63/179 (35%), Positives = 92/179 (51%), Gaps = 10/179 (5%)
 Frame = -3

Query: 512 SELHPPNGQT*YVSHVGTIQLASDIVLKNVLVVPTFQYNLLSVAQLTHDTSSTVSFTPSK 333
           +E+  P G    ++ +G I+L S++ LKNVL +P F+ NLLSV+Q T D    + F    
Sbjct: 472 NEVTLPTGSNVKIAGIGVIKLNSNLTLKNVLYIPEFRLNLLSVSQQTKDMKCKIYFDEDC 531

Query: 332 CQLQDSL----LKRGGEIGDLCDGLYKLSTVKLNSTHI---ISPTALQSSHTESSIVKWH 174
           C +QD +    + RG +IG    GLY L T  +  T +    S T  Q  +       WH
Sbjct: 532 CVIQDPIKEQKIGRGNQIG----GLYVLDTSSVECTSVDINSSVTEKQYCNAVVDSALWH 587

Query: 173 RRFGHPSL---NVLKPISTIDLSFKSVLPDCEICHLAKQVRLPFPVRNSVSTDLFEIIN 6
            R GHPS    +VL  +  +    K  L  C IC  AKQ  L FP +N++S + F++I+
Sbjct: 588 SRLGHPSYEKNDVLHDVLGLPKRNKEDLVHCSICQKAKQKHLSFPSKNNMSENKFDLIH 646


>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
          Length = 1125

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 7/172 (4%)
 Frame = -3

Query: 497 PNGQT*YVSHVGTIQLASDIVLKNVLVVPTFQYNLLSVAQLTHDTSSTVSFTPSKCQLQD 318
           P+G+   ++ +G + L S   LKNVL VP+F+ +L+SV+++T D + +V+F P  C LQD
Sbjct: 141 PSGEQAPITSIGNLPLNSAATLKNVLGVPSFKVDLMSVSRVTKDLNCSVTFFPHWCILQD 200

Query: 317 SLLKRGGEIGDLCDGLYKLSTVKLNSTHIISPTAL------QSSHTESSIVKWHRRFGHP 156
              +    +G+  DGLY L  +        +P+A        SS   SS   WHRR GH 
Sbjct: 201 LTTRTTIGLGEQRDGLYYLVALASEKPKTQTPSAATTSCRSPSSQVTSSTALWHRRLGHL 260

Query: 155 SLNVLKPISTIDLSFKSVLPD-CEICHLAKQVRLPFPVRNSVSTDLFEIINC 3
           S + L  ++   L+F     + C++C LAKQ +LPF V +  S   FE+I+C
Sbjct: 261 SSSRLDFMAKHLLNFHFQSNNACDVCALAKQRQLPFSVSSISSVRPFELIHC 312