BLASTX nr result

ID: Cnidium21_contig00046180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046180
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323840.1| predicted protein [Populus trichocarpa] gi|2...   240   1e-61
ref|XP_002517483.1| GTP-binding protein lepA, putative [Ricinus ...   239   2e-61
ref|XP_002277245.1| PREDICTED: translation factor GUF1 homolog, ...   234   5e-60
ref|XP_003533605.1| PREDICTED: translation factor GUF1 homolog, ...   233   1e-59
ref|XP_004162590.1| PREDICTED: LOW QUALITY PROTEIN: translation ...   226   2e-57

>ref|XP_002323840.1| predicted protein [Populus trichocarpa] gi|222866842|gb|EEF03973.1|
           predicted protein [Populus trichocarpa]
          Length = 611

 Score =  240 bits (612), Expect = 1e-61
 Identities = 120/149 (80%), Positives = 128/149 (85%)
 Frame = -1

Query: 448 EIVDVGIMHPELRPTGILLTGQVGYIVTGMRSTKEARVGDTLFHHRTSVELLPGFKAAKH 269
           E+ DVGIMHPEL PTG+LLTGQVGYIV+GMRSTKEARVGDTL H R SVE LPGFK AKH
Sbjct: 249 EVADVGIMHPELTPTGVLLTGQVGYIVSGMRSTKEARVGDTLHHSRFSVESLPGFKPAKH 308

Query: 268 MVFSGVYPVDGSDFEALNSAIERLTCNDASVSVTKESSTAXXXXXXXXXXXXLHMDVFHQ 89
           MVFSG+YPVDGSDF+ALN AIERLTCNDASVSVTKESS+A            LHMDVFHQ
Sbjct: 309 MVFSGLYPVDGSDFDALNHAIERLTCNDASVSVTKESSSALGLGFRCGFLGLLHMDVFHQ 368

Query: 88  RLEQEHGAHVISTVPTVPYTFEFSDGSKL 2
           RLEQEHGAHVISTVPTVPY FE+SDGSK+
Sbjct: 369 RLEQEHGAHVISTVPTVPYIFEYSDGSKV 397


>ref|XP_002517483.1| GTP-binding protein lepA, putative [Ricinus communis]
           gi|317411652|sp|B9RUN8.1|GUF1_RICCO RecName:
           Full=Translation factor GUF1 homolog, mitochondrial;
           AltName: Full=Elongation factor 4 homolog; Short=EF-4;
           AltName: Full=GTPase GUF1 homolog; AltName:
           Full=Ribosomal back-translocase; Flags: Precursor
           gi|223543494|gb|EEF45025.1| GTP-binding protein lepA,
           putative [Ricinus communis]
          Length = 673

 Score =  239 bits (610), Expect = 2e-61
 Identities = 119/149 (79%), Positives = 129/149 (86%)
 Frame = -1

Query: 448 EIVDVGIMHPELRPTGILLTGQVGYIVTGMRSTKEARVGDTLFHHRTSVELLPGFKAAKH 269
           EI+DVG MHPEL PTGILLTGQVGY+V+GMRSTKEARVGDTL+H RTSVE LPGFK AKH
Sbjct: 309 EILDVGFMHPELTPTGILLTGQVGYVVSGMRSTKEARVGDTLYHSRTSVEPLPGFKPAKH 368

Query: 268 MVFSGVYPVDGSDFEALNSAIERLTCNDASVSVTKESSTAXXXXXXXXXXXXLHMDVFHQ 89
           MVFSG+YP DGSDF+ALN AIERLTCNDASVSVTKESS+A            LHMDVFHQ
Sbjct: 369 MVFSGLYPADGSDFDALNHAIERLTCNDASVSVTKESSSALGLGFRCGFLGLLHMDVFHQ 428

Query: 88  RLEQEHGAHVISTVPTVPYTFEFSDGSKL 2
           RLEQE+GAHVISTVPTVPY FE+SDGSK+
Sbjct: 429 RLEQEYGAHVISTVPTVPYIFEYSDGSKV 457


>ref|XP_002277245.1| PREDICTED: translation factor GUF1 homolog, mitochondrial [Vitis
           vinifera]
          Length = 681

 Score =  234 bits (597), Expect = 5e-60
 Identities = 115/149 (77%), Positives = 128/149 (85%)
 Frame = -1

Query: 448 EIVDVGIMHPELRPTGILLTGQVGYIVTGMRSTKEARVGDTLFHHRTSVELLPGFKAAKH 269
           E+ DVGIMHPEL+ TG+LLTGQVGY+V+GMRSTKEARVGDTL H+++ VE LPGFK AKH
Sbjct: 317 EVFDVGIMHPELKSTGVLLTGQVGYVVSGMRSTKEARVGDTLHHNKSIVEPLPGFKPAKH 376

Query: 268 MVFSGVYPVDGSDFEALNSAIERLTCNDASVSVTKESSTAXXXXXXXXXXXXLHMDVFHQ 89
           MVFSG+YP DGSDFEALN AIERLTCNDASVSVTKESSTA            LHMDVFHQ
Sbjct: 377 MVFSGLYPADGSDFEALNHAIERLTCNDASVSVTKESSTALGLGFRCGFLGLLHMDVFHQ 436

Query: 88  RLEQEHGAHVISTVPTVPYTFEFSDGSKL 2
           RLEQE+GAH+ISTVPTVPY FE+SDGSK+
Sbjct: 437 RLEQEYGAHIISTVPTVPYIFEYSDGSKI 465


>ref|XP_003533605.1| PREDICTED: translation factor GUF1 homolog, mitochondrial-like
           [Glycine max]
          Length = 675

 Score =  233 bits (594), Expect = 1e-59
 Identities = 115/149 (77%), Positives = 126/149 (84%)
 Frame = -1

Query: 448 EIVDVGIMHPELRPTGILLTGQVGYIVTGMRSTKEARVGDTLFHHRTSVELLPGFKAAKH 269
           E  D+GIMHPEL PTGILLTGQVGY+V+GMRSTKEARVGDT++H R++VE LPGFK AKH
Sbjct: 311 EASDIGIMHPELTPTGILLTGQVGYVVSGMRSTKEARVGDTIYHTRSTVEPLPGFKPAKH 370

Query: 268 MVFSGVYPVDGSDFEALNSAIERLTCNDASVSVTKESSTAXXXXXXXXXXXXLHMDVFHQ 89
           MVFSG+YP DGSDFEALN AIERLTCNDASVS+ KE+STA            LHMDVFHQ
Sbjct: 371 MVFSGLYPADGSDFEALNHAIERLTCNDASVSIAKETSTALGLGFRCGFLGLLHMDVFHQ 430

Query: 88  RLEQEHGAHVISTVPTVPYTFEFSDGSKL 2
           RLEQE+GAHVISTVPTVPY FEF DGSKL
Sbjct: 431 RLEQEYGAHVISTVPTVPYIFEFHDGSKL 459


>ref|XP_004162590.1| PREDICTED: LOW QUALITY PROTEIN: translation factor GUF1 homolog,
           mitochondrial-like [Cucumis sativus]
          Length = 766

 Score =  226 bits (575), Expect = 2e-57
 Identities = 112/148 (75%), Positives = 124/148 (83%)
 Frame = -1

Query: 448 EIVDVGIMHPELRPTGILLTGQVGYIVTGMRSTKEARVGDTLFHHRTSVELLPGFKAAKH 269
           E++DVGIMHPEL  TGILLTGQVGY+V+GMRSTKEAR+GDTL   +T VE LPGFK  KH
Sbjct: 402 EVLDVGIMHPELTSTGILLTGQVGYVVSGMRSTKEARIGDTLHQSKTVVEPLPGFKPVKH 461

Query: 268 MVFSGVYPVDGSDFEALNSAIERLTCNDASVSVTKESSTAXXXXXXXXXXXXLHMDVFHQ 89
           MVFSG++P DGSDF+ALN AIERLTCNDASVSVTKE+STA            LHMDVFHQ
Sbjct: 462 MVFSGLFPADGSDFDALNHAIERLTCNDASVSVTKETSTALGLGFRCGFLGLLHMDVFHQ 521

Query: 88  RLEQEHGAHVISTVPTVPYTFEFSDGSK 5
           RLEQE+GAHVISTVPTVPY FE+SDGSK
Sbjct: 522 RLEQEYGAHVISTVPTVPYIFEYSDGSK 549


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