BLASTX nr result

ID: Cnidium21_contig00046173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046173
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]   102   5e-20
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...    96   5e-18
gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]             93   3e-17
ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783...    93   4e-17
ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819...    93   4e-17

>emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]
          Length = 334

 Score =  102 bits (254), Expect = 5e-20
 Identities = 50/130 (38%), Positives = 79/130 (60%), Gaps = 3/130 (2%)
 Frame = +1

Query: 205 NTNTSGRISYQ---EMLNPLFLHPSDNVTSIQIDKLQGSADYRTWSRSMEINLASKRKLG 375
           +TN +G  S +   E L+P  LH SD+   + + K+    +Y TWSR+M I+L++K K+G
Sbjct: 2   DTNKTGLTSSKATTEALDPFSLHHSDHPGMVLVSKVLEGDNYSTWSRAMRISLSAKDKIG 61

Query: 376 FVTGTITKSTDDDVKAEMWDTCNSMVIAWLTSNVSPSVKKSIMFMTNASDIWKHLEKRFA 555
           FVTG+I   +  D     W  CN MVI+WL +++ P +  S+++   AS+IW  L +RF+
Sbjct: 62  FVTGSIKPPSSTDDSFPSWQRCNDMVISWLLNSIHPDIASSVIYAETASEIWADLRERFS 121

Query: 556 LTSGSRKYKI 585
             + SR Y+I
Sbjct: 122 QGNDSRIYQI 131


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 46/118 (38%), Positives = 75/118 (63%), Gaps = 4/118 (3%)
 Frame = +1

Query: 247 NPLFLHPSD----NVTSIQIDKLQGSADYRTWSRSMEINLASKRKLGFVTGTITKSTDDD 414
           +P FLH +D    N+ S ++D+     +Y  WS +M I+L +K K GF+ GT+++  + D
Sbjct: 60  SPFFLHSADHPGLNIISHRLDE----TNYGDWSVAMLISLDAKNKTGFIDGTLSRPLESD 115

Query: 415 VKAEMWDTCNSMVIAWLTSNVSPSVKKSIMFMTNASDIWKHLEKRFALTSGSRKYKIS 588
           +   +W  CNSMV +WL ++VSP + +SI+ M +ASDIW+ L  RF +T+  R Y ++
Sbjct: 116 LNFRLWSRCNSMVKSWLLNSVSPQIYRSILRMNDASDIWRDLNSRFNVTNLPRTYNLT 173


>gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
          Length = 1428

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 45/114 (39%), Positives = 71/114 (62%), Gaps = 1/114 (0%)
 Frame = +1

Query: 247 NPLFLHPSDNVTSIQID-KLQGSADYRTWSRSMEINLASKRKLGFVTGTITKSTDDDVKA 423
           +PLF+  SD+ +++ I  KL GS  Y  WSR+M I L  +RK GFVTG  T++   D   
Sbjct: 10  DPLFIGNSDSSSAVLIPIKLVGSEKYGIWSRAMRIALLGRRKYGFVTGACTRALYKDELH 69

Query: 424 EMWDTCNSMVIAWLTSNVSPSVKKSIMFMTNASDIWKHLEKRFALTSGSRKYKI 585
           E W+TCN++V++WL + VS  +   I++ TN+  +W  L++RF   +  R Y++
Sbjct: 70  EQWETCNAIVLSWLMNTVSEELLSGIVYATNSCSVWNDLKERFDKVNRVRIYQL 123


>ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783177 [Glycine max]
          Length = 2219

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 40/104 (38%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
 Frame = +1

Query: 247 NPLFLHPSDNVTSIQIDKLQGSADYRTWSRSMEINLASKRKLGFVTGTITKSTDD-DVKA 423
           +P F+HPSD  +S+++  L   ++Y +W+RS+   L +K K  F+ GTI    D  D   
Sbjct: 212 SPFFVHPSDGPSSVKVTPLLDGSNYHSWARSLRRALGAKLKFEFLDGTIPMPVDAFDPSF 271

Query: 424 EMWDTCNSMVIAWLTSNVSPSVKKSIMFMTNASDIWKHLEKRFA 555
             W+ CN ++ +W+ ++V PS+ +SI+FM NASD+W  L++RF+
Sbjct: 272 RAWNRCNMLIHSWILNSVEPSISRSIVFMDNASDVWLDLKERFS 315


>ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819074 [Glycine max]
          Length = 1750

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 40/104 (38%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
 Frame = +1

Query: 247 NPLFLHPSDNVTSIQIDKLQGSADYRTWSRSMEINLASKRKLGFVTGTITKSTDD-DVKA 423
           +P F+HPSD  +S+++  L   ++Y +W+RS+   L +K K  F+ GTI    D  D   
Sbjct: 19  SPFFVHPSDGPSSVKVTPLLDGSNYHSWARSLRRALGAKLKFEFLDGTIPMPVDAFDPSF 78

Query: 424 EMWDTCNSMVIAWLTSNVSPSVKKSIMFMTNASDIWKHLEKRFA 555
             W+ CN ++ +W+ ++V PS+ +SI+FM NASD+W  L++RF+
Sbjct: 79  RAWNRCNMLIHSWILNSVEPSISRSIVFMDNASDVWLDLKERFS 122


Top