BLASTX nr result

ID: Cnidium21_contig00046165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046165
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
dbj|BAK07990.1| predicted protein [Hordeum vulgare subsp. vulgare]     91   1e-16
ref|XP_003573904.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
ref|NP_001045762.2| Os02g0127600 [Oryza sativa Japonica Group] g...    87   1e-15
gb|EEC72399.1| hypothetical protein OsI_05688 [Oryza sativa Indi...    87   1e-15

>ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Vitis vinifera]
          Length = 881

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/90 (50%), Positives = 59/90 (65%)
 Frame = -1

Query: 332  QQLFPMDVFTYNLLIRRVIMAKRIPNERRMERACTLFKRLCQKGIEPNKMTYDYIVHGFS 153
            QQ FP+D++TYN+L+RR+  +        M+ A  LF R+CQKG EPN+ TYD +VHG  
Sbjct: 799  QQCFPLDLYTYNMLLRRLTRSD-------MDLALELFNRICQKGYEPNRWTYDILVHGLF 851

Query: 152  KFGMKSEAKSWSEEMERRGFEHTICTKMLL 63
            K G  SEA  W EEM  +GFE T  TK+L+
Sbjct: 852  KHGRTSEANKWVEEMFCKGFEPTEATKLLI 881


>dbj|BAK07990.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 912

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/89 (48%), Positives = 59/89 (66%)
 Frame = -1

Query: 332  QQLFPMDVFTYNLLIRRVIMAKRIPNERRMERACTLFKRLCQKGIEPNKMTYDYIVHGFS 153
            +Q FP+D++TYN+L+R + MA R      M+ AC +F+RLCQ+G  PN+ T+D +VHGF 
Sbjct: 813  EQFFPVDIYTYNMLLRGLSMAGR------MDSACNMFERLCQRGYLPNRYTFDIMVHGFC 866

Query: 152  KFGMKSEAKSWSEEMERRGFEHTICTKML 66
            K G +SEA+ W E M R GF  T  T  L
Sbjct: 867  KHGSRSEAERWMEAMYRNGFYPTWYTMRL 895


>ref|XP_003573904.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            isoform 1 [Brachypodium distachyon]
            gi|357146190|ref|XP_003573905.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At1g71210-like isoform 2 [Brachypodium distachyon]
          Length = 905

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 42/89 (47%), Positives = 60/89 (67%)
 Frame = -1

Query: 332  QQLFPMDVFTYNLLIRRVIMAKRIPNERRMERACTLFKRLCQKGIEPNKMTYDYIVHGFS 153
            +Q FP+D++TYN+LIR + MA R      M+ AC +F+RLC+KG +PN+ T+D +VHGF 
Sbjct: 805  EQFFPVDIYTYNMLIRGLSMAGR------MDSACNMFERLCRKGYQPNRWTFDTMVHGFC 858

Query: 152  KFGMKSEAKSWSEEMERRGFEHTICTKML 66
            + G ++EA+ W E M R GF  T  T  L
Sbjct: 859  RHGNRNEAERWMEAMYRNGFYPTWYTMRL 887


>ref|NP_001045762.2| Os02g0127600 [Oryza sativa Japonica Group]
            gi|255670569|dbj|BAF07676.2| Os02g0127600 [Oryza sativa
            Japonica Group]
          Length = 886

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/87 (48%), Positives = 56/87 (64%)
 Frame = -1

Query: 323  FPMDVFTYNLLIRRVIMAKRIPNERRMERACTLFKRLCQKGIEPNKMTYDYIVHGFSKFG 144
            FP+DV+TYN+L+R + M  R      M+ AC LF+RLC+KG EPN+ T+D +VHGF K  
Sbjct: 790  FPVDVYTYNMLLRGLSMVGR------MDSACNLFERLCRKGYEPNRWTFDIMVHGFCKNS 843

Query: 143  MKSEAKSWSEEMERRGFEHTICTKMLL 63
             + EA+ W E M R GF  T   K L+
Sbjct: 844  DRDEAERWMEAMHRNGFYPTCLYKYLI 870


>gb|EEC72399.1| hypothetical protein OsI_05688 [Oryza sativa Indica Group]
          Length = 831

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/87 (48%), Positives = 56/87 (64%)
 Frame = -1

Query: 323 FPMDVFTYNLLIRRVIMAKRIPNERRMERACTLFKRLCQKGIEPNKMTYDYIVHGFSKFG 144
           FP+DV+TYN+L+R + M  R      M+ AC LF+RLC+KG EPN+ T+D +VHGF K  
Sbjct: 735 FPVDVYTYNMLLRGLSMVGR------MDSACNLFERLCRKGYEPNRWTFDIMVHGFCKNS 788

Query: 143 MKSEAKSWSEEMERRGFEHTICTKMLL 63
            + EA+ W E M R GF  T   K L+
Sbjct: 789 DRDEAERWMEAMHRNGFYPTCLYKYLI 815


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