BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046155
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   134   1e-29
sp|P29684.1|RBS_HEVBR RecName: Full=Ribulose bisphosphate carbox...   132   2e-29
gb|AAF06098.1| ribulose 1,5-bisphosphate carboxylase small chain...   130   1e-28
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox...   129   3e-28
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai...   129   3e-28

>dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Eucalyptus globulus]
          Length = 181

 Score =  134 bits (336), Expect = 1e-29
 Identities = 62/78 (79%), Positives = 72/78 (92%)
 Frame = +3

Query: 60  NRATPAQASMVAPFTGLKSTATFPTSRKSADITTIASNGGKVQCMQVWPPRGKKKFETLS 239
           NRA+PAQASMVAPFTGLKS + FP +RKSADIT++ASNGG+VQCMQVWPP GKKKFETLS
Sbjct: 15  NRASPAQASMVAPFTGLKSASAFPVTRKSADITSLASNGGRVQCMQVWPPIGKKKFETLS 74

Query: 240 YLPPLTKGELAKEVDYLL 293
           YLPPL++ EL KE++YLL
Sbjct: 75  YLPPLSREELLKEIEYLL 92


>sp|P29684.1|RBS_HEVBR RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|168217|gb|AAA33361.1|
           ribulose-1,5-bisphosphate carboxylase small subunit
           [Hevea brasiliensis]
          Length = 183

 Score =  132 bits (333), Expect = 2e-29
 Identities = 64/79 (81%), Positives = 74/79 (93%), Gaps = 1/79 (1%)
 Frame = +3

Query: 60  NRATPAQASMVAPFTGLKSTATFPTSRKSA-DITTIASNGGKVQCMQVWPPRGKKKFETL 236
           NRA+PAQASMVAPFTGLKST+ FPT+RK+  DIT+IASNGG+VQCMQVWPPRGKK +ETL
Sbjct: 15  NRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCMQVWPPRGKKFYETL 74

Query: 237 SYLPPLTKGELAKEVDYLL 293
           SYLPPLT+ +LAKEV+YLL
Sbjct: 75  SYLPPLTREQLAKEVEYLL 93


>gb|AAF06098.1| ribulose 1,5-bisphosphate carboxylase small chain precursor
           [Manihot esculenta] gi|6272551|gb|AAF06101.1| ribulose
           1,5-bisphosphate carboxylase small chain precursor
           [Manihot esculenta]
          Length = 184

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/79 (78%), Positives = 73/79 (92%), Gaps = 1/79 (1%)
 Frame = +3

Query: 60  NRATPAQASMVAPFTGLKSTATFP-TSRKSADITTIASNGGKVQCMQVWPPRGKKKFETL 236
           NRA+PAQASMVAPFTGLKST+ FP T++ SADIT++ASNGG+VQCMQVWP RGKKKFETL
Sbjct: 15  NRASPAQASMVAPFTGLKSTSAFPATTKTSADITSLASNGGRVQCMQVWPTRGKKKFETL 74

Query: 237 SYLPPLTKGELAKEVDYLL 293
           SYLPPL++ +LA E+DYLL
Sbjct: 75  SYLPPLSREQLASEIDYLL 93


>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Aralia elata]
          Length = 183

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/78 (79%), Positives = 68/78 (87%)
 Frame = +3

Query: 60  NRATPAQASMVAPFTGLKSTATFPTSRKSADITTIASNGGKVQCMQVWPPRGKKKFETLS 239
           +RA PAQASMVAPFTGLKSTA FP +RK  DIT++ SNGG+VQCM+VWPP G KKFETLS
Sbjct: 15  SRAAPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMKVWPPLGLKKFETLS 74

Query: 240 YLPPLTKGELAKEVDYLL 293
           YLPPLT  ELAKEVDYLL
Sbjct: 75  YLPPLTNEELAKEVDYLL 92


>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
           precursor, putative [Ricinus communis]
           gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
           carboxylase small chain, chloroplast precursor, putative
           [Ricinus communis]
          Length = 185

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/79 (78%), Positives = 72/79 (91%), Gaps = 1/79 (1%)
 Frame = +3

Query: 60  NRATPAQASMVAPFTGLKSTATFPTSRKS-ADITTIASNGGKVQCMQVWPPRGKKKFETL 236
           NRA+PAQASMVAPFTGLKST+ FP +RK+  DITT+A+NGG+VQCMQVWPP GKKKFETL
Sbjct: 15  NRASPAQASMVAPFTGLKSTSAFPVTRKTNTDITTLANNGGRVQCMQVWPPLGKKKFETL 74

Query: 237 SYLPPLTKGELAKEVDYLL 293
           SYLP LT+ +LAKEV+YLL
Sbjct: 75  SYLPDLTREQLAKEVEYLL 93