BLASTX nr result

ID: Cnidium21_contig00046142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046142
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]   102   3e-20
gb|AAT38747.2| Polyprotein, putative [Solanum demissum]               101   6e-20
gb|AAO26684.1|AF478370_1 gag-pol polyprotein [Vitis vinifera]         101   7e-20
emb|CAN74964.1| hypothetical protein VITISV_006810 [Vitis vinifera]   101   7e-20
emb|CAN83721.1| hypothetical protein VITISV_003961 [Vitis vinifera]   100   2e-19

>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
          Length = 1300

 Score =  102 bits (254), Expect = 3e-20
 Identities = 45/96 (46%), Positives = 68/96 (70%)
 Frame = +1

Query: 1    ITVILAYVDDLLICGSDIAQTNALKNMLSTKFHMKDLGQVCYFLGLEIDRSPSGFFVSQQ 180
            + ++L YVDDL+I G D+ +    K  LS +F MK+LGQ+ +FLGLE+DR+  G F+ QQ
Sbjct: 972  LAIVLVYVDDLIITGDDVEEIFRTKENLSVRFEMKELGQLKHFLGLEVDRTNEGIFLCQQ 1031

Query: 181  KYVKDLLEEYGMSQAKPISLPLDSRLKLTQNKGNPL 288
            KY KDLL+++GM + KPIS P++   K+ +++G  L
Sbjct: 1032 KYAKDLLKKFGMLECKPISTPMEPNAKMCEHEGKDL 1067


>gb|AAT38747.2| Polyprotein, putative [Solanum demissum]
          Length = 1402

 Score =  101 bits (252), Expect = 6e-20
 Identities = 49/99 (49%), Positives = 68/99 (68%)
 Frame = +1

Query: 1    ITVILAYVDDLLICGSDIAQTNALKNMLSTKFHMKDLGQVCYFLGLEIDRSPSGFFVSQQ 180
            I +++ YVDD++I  SD A  ++LK  L + FH KDLGQ+ YFLG+E+ RS  G F+SQ+
Sbjct: 1101 IILLVVYVDDIVITRSDYAGISSLKLFLHSMFHTKDLGQLKYFLGIEVSRSKKGIFLSQR 1160

Query: 181  KYVKDLLEEYGMSQAKPISLPLDSRLKLTQNKGNPLPNP 297
            KY+ DLLEE G S AKP S P+    +LT + G+P  +P
Sbjct: 1161 KYILDLLEETGKSAAKPCSTPMVPNTQLTNDDGDPFDDP 1199


>gb|AAO26684.1|AF478370_1 gag-pol polyprotein [Vitis vinifera]
          Length = 326

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/99 (47%), Positives = 70/99 (70%)
 Frame = +1

Query: 1   ITVILAYVDDLLICGSDIAQTNALKNMLSTKFHMKDLGQVCYFLGLEIDRSPSGFFVSQQ 180
           I +++ YVDD++I G+D A T+ LK  + +KFH KDLG++ YFLG+E+ RS  G F+SQ+
Sbjct: 3   IILLVVYVDDIVITGNDHAGTSDLKTFMHSKFHTKDLGELKYFLGIEVSRSKKGMFLSQR 62

Query: 181 KYVKDLLEEYGMSQAKPISLPLDSRLKLTQNKGNPLPNP 297
           KYV DLL+E G  +AKP + P+   ++L  + G+P  NP
Sbjct: 63  KYVLDLLKETGKIEAKPCTTPMVPNVQLMPDDGDPFYNP 101


>emb|CAN74964.1| hypothetical protein VITISV_006810 [Vitis vinifera]
          Length = 1248

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/98 (48%), Positives = 69/98 (70%)
 Frame = +1

Query: 1    ITVILAYVDDLLICGSDIAQTNALKNMLSTKFHMKDLGQVCYFLGLEIDRSPSGFFVSQQ 180
            I +++ YVDD++I GSD A  ++LK  + +KFH KDLG++ YFLG+E+ RS  G F+SQ+
Sbjct: 969  IILLVVYVDDIVITGSDCAGISSLKLFMHSKFHTKDLGELKYFLGVEVSRSKRGIFLSQR 1028

Query: 181  KYVKDLLEEYGMSQAKPISLPLDSRLKLTQNKGNPLPN 294
            KYV DLL E G  +AKP S P+   + LT++ G+P  N
Sbjct: 1029 KYVLDLLAETGKMEAKPCSTPMIPNVHLTKDDGDPFDN 1066


>emb|CAN83721.1| hypothetical protein VITISV_003961 [Vitis vinifera]
          Length = 1101

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/88 (51%), Positives = 65/88 (73%)
 Frame = +1

Query: 1    ITVILAYVDDLLICGSDIAQTNALKNMLSTKFHMKDLGQVCYFLGLEIDRSPSGFFVSQQ 180
            IT ++ YVDD+++ G+D+ +  AL+N LS +F MKDLG + YFLG+E+ RS  G F+SQ+
Sbjct: 777  ITTLIVYVDDMVVTGNDLEERKALQNYLSREFEMKDLGHLKYFLGIEVSRSSEGIFLSQR 836

Query: 181  KYVKDLLEEYGMSQAKPISLPLDSRLKL 264
            KY  DLL+E GMS  +PI+ P++  LKL
Sbjct: 837  KYALDLLQETGMSGCQPINTPIEEGLKL 864


Top