BLASTX nr result

ID: Cnidium21_contig00046131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046131
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510285.1| signal peptidase I, putative [Ricinus commun...    77   2e-12
ref|XP_002284120.1| PREDICTED: probable thylakoidal processing p...    73   3e-11
ref|XP_003602968.1| Thylakoidal processing peptidase [Medicago t...    72   6e-11
ref|XP_003602967.1| Thylakoidal processing peptidase [Medicago t...    72   6e-11
ref|XP_003523894.1| PREDICTED: probable thylakoidal processing p...    61   8e-08

>ref|XP_002510285.1| signal peptidase I, putative [Ricinus communis]
           gi|223550986|gb|EEF52472.1| signal peptidase I, putative
           [Ricinus communis]
          Length = 831

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
 Frame = -1

Query: 316 TSNYSNLAGEILSSSSNSPVSMGLSSILKSTNVVPGTGSS--FGVSQLKASFVLPFTQVS 143
           TS YS +AGEI  ++  SP+++GL  ++KST  V  +GS+  FG+S LKAS +LP  Q S
Sbjct: 72  TSLYSTIAGEIFGNNCKSPIAVGLIELMKSTAGVGVSGSTGVFGISPLKASSILPVLQGS 131

Query: 142 KWFPCNVMSVGNKVEQVGTKCEKSKILVG--TKCEKNKS 32
           +W PCN  S G K  +  T+   S +  G   KC KN S
Sbjct: 132 RWLPCNEPSPGQKNNEPSTRQNSSDVDRGGTVKCVKNGS 170


>ref|XP_002284120.1| PREDICTED: probable thylakoidal processing peptidase 2,
           chloroplastic [Vitis vinifera]
           gi|147810057|emb|CAN78280.1| hypothetical protein
           VITISV_021649 [Vitis vinifera]
          Length = 368

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/83 (48%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
 Frame = -1

Query: 316 TSNYSNLAGEILSSSSNSPVSMGLSSILKS-TNVVPGTGSSFGVSQLKASFVLPFTQVSK 140
           TS YS LAGE+   S  +P+ +GL S++KS T V   +   FGVS LKA+ +LPF   SK
Sbjct: 75  TSAYSTLAGEVFGDSCRNPLIVGLISLMKSSTGVSESSVGVFGVSPLKATSILPFLPGSK 134

Query: 139 WFPCNVM---SVGNKVEQVGTKC 80
           W PCN     SVG++V++ GT+C
Sbjct: 135 WLPCNEPIQGSVGDEVDKGGTQC 157


>ref|XP_003602968.1| Thylakoidal processing peptidase [Medicago truncatula]
           gi|355492016|gb|AES73219.1| Thylakoidal processing
           peptidase [Medicago truncatula]
          Length = 334

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
 Frame = -1

Query: 319 PTSNYSNLAGEILSSSSNSPVSMGLSSILKSTNVVPGTGS---SFGVSQLKASFVLPFTQ 149
           P S YS LAGEILS S N+P+ +GL S++KST +   T +   + G+S  K S ++PF Q
Sbjct: 71  PVSVYSTLAGEILSESCNNPIILGLISMMKSTAISGSTSAAMGAMGISPFKTSSIIPFLQ 130

Query: 148 VSKWFPCN---VMSVGNKVEQVGTKCEKSKILVGTKCEKNKSFVEQVGNN 8
            SKW PCN     +   +V++ GT+ +   + V +  E      ++   N
Sbjct: 131 GSKWLPCNESVPTATTWEVDKGGTRIQSQPVSVSSDKESRLDLNQKENTN 180


>ref|XP_003602967.1| Thylakoidal processing peptidase [Medicago truncatula]
           gi|355492015|gb|AES73218.1| Thylakoidal processing
           peptidase [Medicago truncatula]
          Length = 375

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
 Frame = -1

Query: 319 PTSNYSNLAGEILSSSSNSPVSMGLSSILKSTNVVPGTGS---SFGVSQLKASFVLPFTQ 149
           P S YS LAGEILS S N+P+ +GL S++KST +   T +   + G+S  K S ++PF Q
Sbjct: 71  PVSVYSTLAGEILSESCNNPIILGLISMMKSTAISGSTSAAMGAMGISPFKTSSIIPFLQ 130

Query: 148 VSKWFPCN---VMSVGNKVEQVGTKCEKSKILVGTKCEKNKSFVEQVGNN 8
            SKW PCN     +   +V++ GT+ +   + V +  E      ++   N
Sbjct: 131 GSKWLPCNESVPTATTWEVDKGGTRIQSQPVSVSSDKESRLDLNQKENTN 180


>ref|XP_003523894.1| PREDICTED: probable thylakoidal processing peptidase 2,
           chloroplastic-like [Glycine max]
          Length = 362

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
 Frame = -1

Query: 313 SNYSNLAGEILSSSSNSPVSMGLSSILKSTNVVPGTGSS----FGVSQLKASFVLPFTQV 146
           S YS L GE L     SP+ +GL SI+KST  V G+ ++    FG+S  K + ++PF   
Sbjct: 70  STYSTLTGEFLGDGCKSPIILGLISIMKSTAGVSGSSAAAAGIFGISPFKTTSIVPFLPG 129

Query: 145 SKWFPCN 125
           SKW PCN
Sbjct: 130 SKWLPCN 136


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