BLASTX nr result

ID: Cnidium21_contig00046130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046130
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26124.3| unnamed protein product [Vitis vinifera]               85   7e-15
emb|CAN84155.1| hypothetical protein VITISV_029853 [Vitis vinifera]    85   7e-15
ref|XP_002311805.1| chromatin remodeling complex subunit [Populu...    75   6e-12
ref|XP_002516857.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
ref|XP_004159854.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    71   8e-11

>emb|CBI26124.3| unnamed protein product [Vitis vinifera]
          Length = 2266

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/58 (72%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
 Frame = +2

Query: 38  KNDSYASNRPPVGPSFIGHDIYQGSVSHLN-SKSLDHESPSSFDTRSAKSHSEERHDS 208
           K D++AS+RPPVGPS  GHDIYQGSVSH +  KS DHESPSS DTRSA S S+ER DS
Sbjct: 117 KIDAFASSRPPVGPSSAGHDIYQGSVSHKSGGKSFDHESPSSLDTRSANSQSQERRDS 174


>emb|CAN84155.1| hypothetical protein VITISV_029853 [Vitis vinifera]
          Length = 771

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/58 (72%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
 Frame = +2

Query: 38  KNDSYASNRPPVGPSFIGHDIYQGSVSHLN-SKSLDHESPSSFDTRSAKSHSEERHDS 208
           K D++AS+RPPVGPS  GHDIYQGSVSH +  KS DHESPSS DTRSA S S+ER DS
Sbjct: 117 KIDAFASSRPPVGPSSAGHDIYQGSVSHKSGGKSFDHESPSSLDTRSANSQSQERRDS 174


>ref|XP_002311805.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222851625|gb|EEE89172.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 3427

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 35/54 (64%), Positives = 42/54 (77%)
 Frame = +2

Query: 38  KNDSYASNRPPVGPSFIGHDIYQGSVSHLNSKSLDHESPSSFDTRSAKSHSEER 199
           K D++AS+RPPVGP   GHD YQGS +  +S+S DHESPSS DTRSA S S+ER
Sbjct: 60  KIDTFASSRPPVGPGTAGHDYYQGSGTQRSSQSFDHESPSSLDTRSANSQSQER 113


>ref|XP_002516857.1| conserved hypothetical protein [Ricinus communis]
           gi|223543945|gb|EEF45471.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 3502

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/54 (62%), Positives = 42/54 (77%)
 Frame = +2

Query: 38  KNDSYASNRPPVGPSFIGHDIYQGSVSHLNSKSLDHESPSSFDTRSAKSHSEER 199
           ++D +AS+RPPVGPS  G D YQG  +H +S+S DHESPSS DTRSA S S+ER
Sbjct: 114 ESDPFASSRPPVGPSGAGQDYYQGPGTHRSSQSFDHESPSSLDTRSANSQSQER 167


>ref|XP_004159854.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101206586,
           partial [Cucumis sativus]
          Length = 2108

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/57 (56%), Positives = 41/57 (71%)
 Frame = +2

Query: 38  KNDSYASNRPPVGPSFIGHDIYQGSVSHLNSKSLDHESPSSFDTRSAKSHSEERHDS 208
           K+   AS++PPVGPS   HD Y GS +H + +S D ESPSS D+RSA S S+E+HDS
Sbjct: 119 KSSPLASSKPPVGPSSTDHDYYPGSATHRSGQSFDQESPSSLDSRSANSQSQEKHDS 175


Top