BLASTX nr result

ID: Cnidium21_contig00046109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046109
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314181.1| predicted protein [Populus trichocarpa] gi|2...   166   1e-39
ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39
ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containi...   165   4e-39
ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containi...   164   9e-39
ref|XP_003542028.1| PREDICTED: pentatricopeptide repeat-containi...   160   8e-38

>ref|XP_002314181.1| predicted protein [Populus trichocarpa] gi|222850589|gb|EEE88136.1|
           predicted protein [Populus trichocarpa]
          Length = 525

 Score =  166 bits (421), Expect = 1e-39
 Identities = 77/110 (70%), Positives = 97/110 (88%)
 Frame = -2

Query: 332 YEDMKRAKVEPNEISFCILATAHAEARLYTVCEAYVEAIEKCMTGNNWSTLDILIMLYGY 153
           + DMKR KVEPNE+SFCILATAHA ARLYTV EAYVEA+EK  +G+NWSTLD+LI+LYG+
Sbjct: 250 FNDMKRFKVEPNEVSFCILATAHAAARLYTVAEAYVEAVEKSCSGDNWSTLDVLIILYGH 309

Query: 152 LGKQKEVKRKWLSLQELPHVMSKSFELAIEAFGRIGEVNRSEELWQEMKT 3
           LGK+KE++R W  + ELPHV SKS+ LAIEA+G+IG+++R+EELW EMK+
Sbjct: 310 LGKEKELERTWGIVLELPHVRSKSYMLAIEAYGKIGQLSRAEELWLEMKS 359


>ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial-like [Glycine max]
          Length = 507

 Score =  166 bits (420), Expect = 2e-39
 Identities = 77/107 (71%), Positives = 94/107 (87%)
 Frame = -2

Query: 323 MKRAKVEPNEISFCILATAHAEARLYTVCEAYVEAIEKCMTGNNWSTLDILIMLYGYLGK 144
           MK A+VEPNEIS+CILA AHA ARLYT  EAYVEA+EK +TGNNWSTLD+L+MLYGYLG 
Sbjct: 235 MKVAQVEPNEISYCILAIAHAVARLYTATEAYVEAVEKSITGNNWSTLDVLLMLYGYLGN 294

Query: 143 QKEVKRKWLSLQELPHVMSKSFELAIEAFGRIGEVNRSEELWQEMKT 3
           QKE++R W ++QELP + SKS+ LAIEAFGRIG++NR+EE+W EMK+
Sbjct: 295 QKELERVWATIQELPSIRSKSYMLAIEAFGRIGQLNRAEEIWLEMKS 341


>ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial [Vitis vinifera]
          Length = 550

 Score =  165 bits (417), Expect = 4e-39
 Identities = 75/110 (68%), Positives = 97/110 (88%)
 Frame = -2

Query: 332 YEDMKRAKVEPNEISFCILATAHAEARLYTVCEAYVEAIEKCMTGNNWSTLDILIMLYGY 153
           + +MK+ +VEPNE+S+C+LATAHA A+LYTV EAYVEA+EK +TGNNWSTLD+LI+LYGY
Sbjct: 275 FGEMKQQQVEPNEVSYCLLATAHAVAKLYTVAEAYVEAVEKSITGNNWSTLDVLIILYGY 334

Query: 152 LGKQKEVKRKWLSLQELPHVMSKSFELAIEAFGRIGEVNRSEELWQEMKT 3
           LGK  +++R W  +QELPHV SKS+ LAIEAFGRIG++NR+EELW E+K+
Sbjct: 335 LGKPTDLERTWGIVQELPHVRSKSYMLAIEAFGRIGQLNRAEELWLEIKS 384


>ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial-like [Cucumis sativus]
           gi|449517541|ref|XP_004165804.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial-like [Cucumis sativus]
          Length = 527

 Score =  164 bits (414), Expect = 9e-39
 Identities = 76/110 (69%), Positives = 94/110 (85%)
 Frame = -2

Query: 332 YEDMKRAKVEPNEISFCILATAHAEARLYTVCEAYVEAIEKCMTGNNWSTLDILIMLYGY 153
           + DM+RAKVEPNE+S+CI+ATAHA A+LYTV EAYVEA+EK + GNNWST D+LI+LYGY
Sbjct: 251 FSDMRRAKVEPNEVSYCIVATAHAVAKLYTVVEAYVEALEKSIAGNNWSTYDVLIILYGY 310

Query: 152 LGKQKEVKRKWLSLQELPHVMSKSFELAIEAFGRIGEVNRSEELWQEMKT 3
           L K+KE++R W  +Q  PH+ SKSF LAIEAFGRIG ++R+EELW EMKT
Sbjct: 311 LNKEKELERTWGIIQGFPHIPSKSFILAIEAFGRIGLLSRAEELWLEMKT 360


>ref|XP_003542028.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial-like [Glycine max]
          Length = 507

 Score =  160 bits (406), Expect = 8e-38
 Identities = 75/110 (68%), Positives = 94/110 (85%)
 Frame = -2

Query: 332 YEDMKRAKVEPNEISFCILATAHAEARLYTVCEAYVEAIEKCMTGNNWSTLDILIMLYGY 153
           +  MK A+V PNEIS+CILA AHA ARLYT  EAYVEA+EK +TGNNWSTLD+L+MLYGY
Sbjct: 232 FSRMKVAQVAPNEISYCILAIAHAVARLYTATEAYVEAVEKSITGNNWSTLDVLLMLYGY 291

Query: 152 LGKQKEVKRKWLSLQELPHVMSKSFELAIEAFGRIGEVNRSEELWQEMKT 3
           LG QKE++R W +++ELP V SKS+ LAIEAFGRIG++N++EELW EM++
Sbjct: 292 LGNQKELERVWATIRELPSVRSKSYMLAIEAFGRIGQLNQAEELWLEMES 341


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