BLASTX nr result

ID: Cnidium21_contig00046075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046075
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN94267.1| chloroplast ribulose-1,5-bisphosphate carboxylase...   192   3e-47
ref|XP_002524206.1| Ribulose bisphosphate carboxylase/oxygenase ...   191   7e-47
gb|ABK96359.1| unknown [Populus trichocarpa x Populus deltoides]      189   2e-46
ref|XP_002315210.1| predicted protein [Populus trichocarpa] gi|2...   188   3e-46
gb|ABK95600.1| unknown [Populus trichocarpa]                          188   3e-46

>gb|ACN94267.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase [Solenostemon scutellarioides]
          Length = 436

 Score =  192 bits (487), Expect = 3e-47
 Identities = 92/110 (83%), Positives = 102/110 (92%)
 Frame = -2

Query: 337 DDAIVKLVDSFPGQSIDFFGALRARVYDDEVRNWVGGVGVENIGRMLVNSKDGPPTFAQP 158
           D+A+V+LVD+FPGQSIDFFGALRARVYDDEVR WV GVGVENIG  LVNS++GPP F QP
Sbjct: 325 DEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVSGVGVENIGTRLVNSREGPPKFEQP 384

Query: 157 KMTLEKLMEYGNMLVQEQENVKRVQLADKYLKDAALGEANKDSIDRGAFF 8
           KMTLEKL+EYG MLVQEQENVKRVQLADKYLKDAALG+ANKD+I+RG FF
Sbjct: 385 KMTLEKLLEYGFMLVQEQENVKRVQLADKYLKDAALGDANKDAIERGTFF 434


>ref|XP_002524206.1| Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast
           precursor, putative [Ricinus communis]
           gi|223536483|gb|EEF38130.1| Ribulose bisphosphate
           carboxylase/oxygenase activase 1, chloroplast precursor,
           putative [Ricinus communis]
          Length = 473

 Score =  191 bits (484), Expect = 7e-47
 Identities = 89/107 (83%), Positives = 101/107 (94%)
 Frame = -2

Query: 328 IVKLVDSFPGQSIDFFGALRARVYDDEVRNWVGGVGVENIGRMLVNSKDGPPTFAQPKMT 149
           +VKLVD+FPGQSIDFFGALRARVYDDEVR W+GGVGVE IG+ LVNSK+GPPTF QPKMT
Sbjct: 329 VVKLVDTFPGQSIDFFGALRARVYDDEVRKWIGGVGVEKIGKSLVNSKEGPPTFEQPKMT 388

Query: 148 LEKLMEYGNMLVQEQENVKRVQLADKYLKDAALGEANKDSIDRGAFF 8
           +EKL+EYGNMLVQEQENVKRVQLADKY+ +AALGEAN+DSI+RG F+
Sbjct: 389 IEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANQDSIERGTFY 435


>gb|ABK96359.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 476

 Score =  189 bits (481), Expect = 2e-46
 Identities = 89/107 (83%), Positives = 101/107 (94%)
 Frame = -2

Query: 328 IVKLVDSFPGQSIDFFGALRARVYDDEVRNWVGGVGVENIGRMLVNSKDGPPTFAQPKMT 149
           IVKLVD+FPGQSIDFFGALRARVYDDEVR W+ GVGV++IG+ LVNS+DGPPTF QPKMT
Sbjct: 332 IVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDSIGKKLVNSRDGPPTFEQPKMT 391

Query: 148 LEKLMEYGNMLVQEQENVKRVQLADKYLKDAALGEANKDSIDRGAFF 8
           +EKL+EYGNMLVQEQENVKRVQLADKYL +A+LGEAN+DSIDRG F+
Sbjct: 392 IEKLLEYGNMLVQEQENVKRVQLADKYLSEASLGEANQDSIDRGTFY 438


>ref|XP_002315210.1| predicted protein [Populus trichocarpa] gi|222864250|gb|EEF01381.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  188 bits (478), Expect = 3e-46
 Identities = 89/107 (83%), Positives = 101/107 (94%)
 Frame = -2

Query: 328 IVKLVDSFPGQSIDFFGALRARVYDDEVRNWVGGVGVENIGRMLVNSKDGPPTFAQPKMT 149
           IVKLVD+FPGQSIDFFGALRARVYDDEVR WV GVGV++IG+ LVNS++GPPTF QPKMT
Sbjct: 282 IVKLVDTFPGQSIDFFGALRARVYDDEVRKWVSGVGVDSIGKKLVNSREGPPTFEQPKMT 341

Query: 148 LEKLMEYGNMLVQEQENVKRVQLADKYLKDAALGEANKDSIDRGAFF 8
           +EKL+EYGNMLVQEQENVKRVQLADKYL +A+LGEAN+DSIDRG F+
Sbjct: 342 IEKLLEYGNMLVQEQENVKRVQLADKYLSEASLGEANQDSIDRGTFY 388


>gb|ABK95600.1| unknown [Populus trichocarpa]
          Length = 476

 Score =  188 bits (478), Expect = 3e-46
 Identities = 89/107 (83%), Positives = 101/107 (94%)
 Frame = -2

Query: 328 IVKLVDSFPGQSIDFFGALRARVYDDEVRNWVGGVGVENIGRMLVNSKDGPPTFAQPKMT 149
           IVKLVD+FPGQSIDFFGALRARVYDDEVR WV GVGV++IG+ LVNS++GPPTF QPKMT
Sbjct: 332 IVKLVDTFPGQSIDFFGALRARVYDDEVRKWVSGVGVDSIGKKLVNSREGPPTFEQPKMT 391

Query: 148 LEKLMEYGNMLVQEQENVKRVQLADKYLKDAALGEANKDSIDRGAFF 8
           +EKL+EYGNMLVQEQENVKRVQLADKYL +A+LGEAN+DSIDRG F+
Sbjct: 392 IEKLLEYGNMLVQEQENVKRVQLADKYLSEASLGEANQDSIDRGTFY 438


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