BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046055
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containi...   164   9e-39
ref|XP_002299231.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36
ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   155   4e-36
ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containi...   155   4e-36
gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Me...   149   3e-34

>ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Vitis vinifera]
          Length = 642

 Score =  164 bits (414), Expect = 9e-39
 Identities = 79/136 (58%), Positives = 100/136 (73%)
 Frame = -3

Query: 411 CVRDLVSWNSMINGFVRNGKADEALRIFREMEKAGVQPDDVTMLGVVSSCAQLEDLNVGM 232
           CVRDLVSWNSMING+VR G A EAL  +REM+  G++PD+VTM+GVVSSCAQLEDL++G 
Sbjct: 169 CVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGR 228

Query: 231 EFHRVIEEKKXXXXXXXXXXXVDMYVKCGDLSAAEDVFEKMEKRTVVSWTTLVVGYIKFG 52
           E H  IEE             +DMY+KCG+L +A  +F+ M  +T+VSWTT+VVGY + G
Sbjct: 229 ESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSG 288

Query: 51  FLDTAKRLLDEMPEKD 4
            LD A +L DEMP+KD
Sbjct: 289 LLDMAWKLFDEMPDKD 304



 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/130 (35%), Positives = 73/130 (56%)
 Frame = -3

Query: 405 RDLVSWNSMINGFVRNGKADEALRIFREMEKAGVQPDDVTMLGVVSSCAQLEDLNVGMEF 226
           +D+V WN+MI G+V   +  EAL +F EM+   + PD+VTM+  +S+C+QL  L+VG+  
Sbjct: 303 KDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWI 362

Query: 225 HRVIEEKKXXXXXXXXXXXVDMYVKCGDLSAAEDVFEKMEKRTVVSWTTLVVGYIKFGFL 46
           H  IE+ +           +DMY KCG ++ A  VF+++  R  ++WT ++ G    G  
Sbjct: 363 HHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNA 422

Query: 45  DTAKRLLDEM 16
             A     EM
Sbjct: 423 HGAIAYFSEM 432



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
 Frame = -3

Query: 393 SWNSMINGFVRNGKADEALRIF-REMEKAGVQPDDVTMLGVVSSCAQLEDLNVGMEFHRV 217
           SWN  I GF+ +    EA+ ++ R ++  G +PD+ T   +  +CA+L  + +G E    
Sbjct: 73  SWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGH 132

Query: 216 IEEKKXXXXXXXXXXXVDMYVKCGDLSAAEDVFEKMEKRTVVSWTTLVVGYIKFGFLDTA 37
           +               + + V CGDL  A  +F+K   R +VSW +++ GY++ G+   A
Sbjct: 133 VLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEA 192

Query: 36  KRLLDEM 16
                EM
Sbjct: 193 LNFYREM 199


>ref|XP_002299231.1| predicted protein [Populus trichocarpa] gi|222846489|gb|EEE84036.1|
           predicted protein [Populus trichocarpa]
          Length = 668

 Score =  155 bits (392), Expect = 3e-36
 Identities = 75/136 (55%), Positives = 97/136 (71%)
 Frame = -3

Query: 411 CVRDLVSWNSMINGFVRNGKADEALRIFREMEKAGVQPDDVTMLGVVSSCAQLEDLNVGM 232
           CVRDLVSWNS+ING+VR  +  EA+ I+++M    V+PD+VTM+GVVS+CAQLE L +G 
Sbjct: 216 CVRDLVSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGR 275

Query: 231 EFHRVIEEKKXXXXXXXXXXXVDMYVKCGDLSAAEDVFEKMEKRTVVSWTTLVVGYIKFG 52
           E HR IEE             +DMYVKCGDL A + +F+ M K+TVVSWTT++VGY K G
Sbjct: 276 EIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNG 335

Query: 51  FLDTAKRLLDEMPEKD 4
            LD A +L  +MPEK+
Sbjct: 336 LLDMAGKLFHDMPEKN 351



 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 44/123 (35%), Positives = 75/123 (60%)
 Frame = -3

Query: 405 RDLVSWNSMINGFVRNGKADEALRIFREMEKAGVQPDDVTMLGVVSSCAQLEDLNVGMEF 226
           +++V+WN+MI   V+   + EAL +FREM+ + ++PD VTML  +S+C+QL  L+ GM  
Sbjct: 350 KNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWT 409

Query: 225 HRVIEEKKXXXXXXXXXXXVDMYVKCGDLSAAEDVFEKMEKRTVVSWTTLVVGYIKFGFL 46
           H  I++             +DMY KCG+++ A  VF +M +R  ++WT ++ G   +G +
Sbjct: 410 HNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNV 469

Query: 45  DTA 37
           + A
Sbjct: 470 NDA 472


>ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g22410, mitochondrial-like [Cucumis sativus]
          Length = 681

 Score =  155 bits (391), Expect = 4e-36
 Identities = 75/136 (55%), Positives = 100/136 (73%)
 Frame = -3

Query: 411 CVRDLVSWNSMINGFVRNGKADEALRIFREMEKAGVQPDDVTMLGVVSSCAQLEDLNVGM 232
           CVRDLVSWNS+ING+VR G ADEA  ++ +M +  V PD+VTM+GVVS+ AQLE+L +G 
Sbjct: 217 CVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGR 276

Query: 231 EFHRVIEEKKXXXXXXXXXXXVDMYVKCGDLSAAEDVFEKMEKRTVVSWTTLVVGYIKFG 52
           + H+ IEE             +DMY+KC ++ AA+ +FE M K+TVVSWTT+V+GY KFG
Sbjct: 277 KLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFG 336

Query: 51  FLDTAKRLLDEMPEKD 4
            L++A RL +EMPEKD
Sbjct: 337 LLESAVRLFNEMPEKD 352



 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/130 (35%), Positives = 74/130 (56%)
 Frame = -3

Query: 405 RDLVSWNSMINGFVRNGKADEALRIFREMEKAGVQPDDVTMLGVVSSCAQLEDLNVGMEF 226
           +D+V WN++I GFV+  ++ EAL +F EM+ + V PD +T++  +S+C+QL  L+VG+  
Sbjct: 351 KDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWM 410

Query: 225 HRVIEEKKXXXXXXXXXXXVDMYVKCGDLSAAEDVFEKMEKRTVVSWTTLVVGYIKFGFL 46
           H  +++             VDMY KCG++  A  VFE+M  R  ++WT ++ G    G  
Sbjct: 411 HHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQP 470

Query: 45  DTAKRLLDEM 16
             A     EM
Sbjct: 471 HAAISYFSEM 480


>ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Cucumis sativus]
          Length = 681

 Score =  155 bits (391), Expect = 4e-36
 Identities = 75/136 (55%), Positives = 100/136 (73%)
 Frame = -3

Query: 411 CVRDLVSWNSMINGFVRNGKADEALRIFREMEKAGVQPDDVTMLGVVSSCAQLEDLNVGM 232
           CVRDLVSWNS+ING+VR G ADEA  ++ +M +  V PD+VTM+GVVS+ AQLE+L +G 
Sbjct: 217 CVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGR 276

Query: 231 EFHRVIEEKKXXXXXXXXXXXVDMYVKCGDLSAAEDVFEKMEKRTVVSWTTLVVGYIKFG 52
           + H+ IEE             +DMY+KC ++ AA+ +FE M K+TVVSWTT+V+GY KFG
Sbjct: 277 KLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFG 336

Query: 51  FLDTAKRLLDEMPEKD 4
            L++A RL +EMPEKD
Sbjct: 337 LLESAVRLFNEMPEKD 352



 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/130 (35%), Positives = 74/130 (56%)
 Frame = -3

Query: 405 RDLVSWNSMINGFVRNGKADEALRIFREMEKAGVQPDDVTMLGVVSSCAQLEDLNVGMEF 226
           +D+V WN++I GFV+  ++ EAL +F EM+ + V PD +T++  +S+C+QL  L+VG+  
Sbjct: 351 KDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWM 410

Query: 225 HRVIEEKKXXXXXXXXXXXVDMYVKCGDLSAAEDVFEKMEKRTVVSWTTLVVGYIKFGFL 46
           H  +++             VDMY KCG++  A  VFE+M  R  ++WT ++ G    G  
Sbjct: 411 HHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQP 470

Query: 45  DTAKRLLDEM 16
             A     EM
Sbjct: 471 HAAISYFSEM 480


>gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
           small; Tetratricopeptide-like helical [Medicago
           truncatula]
          Length = 971

 Score =  149 bits (375), Expect = 3e-34
 Identities = 68/134 (50%), Positives = 100/134 (74%)
 Frame = -3

Query: 408 VRDLVSWNSMINGFVRNGKADEALRIFREMEKAGVQPDDVTMLGVVSSCAQLEDLNVGME 229
           VRDLV+WNSMI G V+ G A EA++I++EME   V+P+++TM+G++SSC+Q++DLN+G E
Sbjct: 221 VRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKE 280

Query: 228 FHRVIEEKKXXXXXXXXXXXVDMYVKCGDLSAAEDVFEKMEKRTVVSWTTLVVGYIKFGF 49
           FH  I+E             +DMYVKCG+L  A  +F+ M ++T+VSWTT+V+GY +FGF
Sbjct: 281 FHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGF 340

Query: 48  LDTAKRLLDEMPEK 7
           LD A+ +L ++PEK
Sbjct: 341 LDVAREILYKIPEK 354



 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/130 (35%), Positives = 74/130 (56%)
 Frame = -3

Query: 405 RDLVSWNSMINGFVRNGKADEALRIFREMEKAGVQPDDVTMLGVVSSCAQLEDLNVGMEF 226
           + +V WN++I+G V+  +  EAL +F EM+   ++PD VTM+  +S+C+QL  L+VG+  
Sbjct: 354 KSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWI 413

Query: 225 HRVIEEKKXXXXXXXXXXXVDMYVKCGDLSAAEDVFEKMEKRTVVSWTTLVVGYIKFGFL 46
           H  IE  K           VDMY KCG+++ A  VFE++ +R  ++WT ++ G    G  
Sbjct: 414 HHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNA 473

Query: 45  DTAKRLLDEM 16
             A     +M
Sbjct: 474 QDALSYFSKM 483



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
 Frame = -3

Query: 402 DLVSWNSMINGFVRNGKADEALRIFREMEKAG-VQPDDVTMLGVVSSCAQLEDLNVGMEF 226
           ++ SWN+ I G+V +G  +    +++ M   G ++PD+ T   ++  C       +G+  
Sbjct: 121 NVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGV 180

Query: 225 HRVIEEKKXXXXXXXXXXXVDMYVKCGDLSAAEDVFEKMEKRTVVSWTTLVVGYIKFGFL 46
              + +             + M + CG+LS A DVF K   R +V+W +++ G +K G  
Sbjct: 181 LGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLA 240

Query: 45  DTAKRLLDEM 16
             A ++  EM
Sbjct: 241 IEAIKIYKEM 250