BLASTX nr result
ID: Cnidium21_contig00046019
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00046019
(593 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei... 240 2e-61
emb|CBI34863.3| unnamed protein product [Vitis vinifera] 240 2e-61
ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotei... 221 7e-56
ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore... 219 2e-55
ref|XP_002521470.1| RNA binding protein, putative [Ricinus commu... 213 3e-53
>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
vinifera]
Length = 2363
Score = 240 bits (612), Expect = 2e-61
Identities = 122/198 (61%), Positives = 146/198 (73%), Gaps = 1/198 (0%)
Frame = -1
Query: 593 QEVMVCEQVKFSRDKRSG-SGSILLPWTPSVYQEVELKAAGGCAMSSSDYKWFSSDMSIV 417
QEVMVCE+VKFS DKRS S ILLPW P+VYQEV+LKA GGCA SSSDYKWFSSDM+ V
Sbjct: 535 QEVMVCEKVKFSFDKRSAVSERILLPWAPAVYQEVDLKATGGCAKSSSDYKWFSSDMATV 594
Query: 416 CVSAHGIIQSKRPGKAIIKVVSIFDSFNYDXXXXXXXXXXXXXXVQHFPVETVVGSSLVA 237
VSA G+IQ+K+PGKA +KVVSIFD FNYD +Q+FPVETVVGS L A
Sbjct: 595 SVSASGVIQAKKPGKAAVKVVSIFDPFNYDEVVVEVALPSSMVMLQNFPVETVVGSQLQA 654
Query: 236 SVTLKASNGDHYFRCDAFSSAIRWNTESDSFRIVYTDRESFLLDEQEVPDLNVSLYGPPC 57
+VT+KASNG +++RCDAFSS +RW S+SF IV E+ +LD+ E + S+YGPPC
Sbjct: 655 AVTMKASNGAYFYRCDAFSSFVRWKAGSESFIIVNATGETPVLDKLESVEPYASVYGPPC 714
Query: 56 AWARIYASGTCRTMLHAS 3
AW +YAS R MLHA+
Sbjct: 715 AWTYVYASSAGRAMLHAT 732
>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
Length = 1961
Score = 240 bits (612), Expect = 2e-61
Identities = 122/198 (61%), Positives = 146/198 (73%), Gaps = 1/198 (0%)
Frame = -1
Query: 593 QEVMVCEQVKFSRDKRSG-SGSILLPWTPSVYQEVELKAAGGCAMSSSDYKWFSSDMSIV 417
QEVMVCE+VKFS DKRS S ILLPW P+VYQEV+LKA GGCA SSSDYKWFSSDM+ V
Sbjct: 460 QEVMVCEKVKFSFDKRSAVSERILLPWAPAVYQEVDLKATGGCAKSSSDYKWFSSDMATV 519
Query: 416 CVSAHGIIQSKRPGKAIIKVVSIFDSFNYDXXXXXXXXXXXXXXVQHFPVETVVGSSLVA 237
VSA G+IQ+K+PGKA +KVVSIFD FNYD +Q+FPVETVVGS L A
Sbjct: 520 SVSASGVIQAKKPGKAAVKVVSIFDPFNYDEVVVEVALPSSMVMLQNFPVETVVGSQLQA 579
Query: 236 SVTLKASNGDHYFRCDAFSSAIRWNTESDSFRIVYTDRESFLLDEQEVPDLNVSLYGPPC 57
+VT+KASNG +++RCDAFSS +RW S+SF IV E+ +LD+ E + S+YGPPC
Sbjct: 580 AVTMKASNGAYFYRCDAFSSFVRWKAGSESFIIVNATGETPVLDKLESVEPYASVYGPPC 639
Query: 56 AWARIYASGTCRTMLHAS 3
AW +YAS R MLHA+
Sbjct: 640 AWTYVYASSAGRAMLHAT 657
>ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Cucumis
sativus]
Length = 1758
Score = 221 bits (563), Expect = 7e-56
Identities = 109/198 (55%), Positives = 147/198 (74%), Gaps = 1/198 (0%)
Frame = -1
Query: 593 QEVMVCEQVKFSRDKRSG-SGSILLPWTPSVYQEVELKAAGGCAMSSSDYKWFSSDMSIV 417
QEV++CEQV+FS D RSG S +I LPWTPSVYQEV L+A GGCA +SSDYKWFSSD+S+V
Sbjct: 444 QEVVICEQVRFSLDNRSGVSRNIFLPWTPSVYQEVLLEATGGCAKTSSDYKWFSSDISVV 503
Query: 416 CVSAHGIIQSKRPGKAIIKVVSIFDSFNYDXXXXXXXXXXXXXXVQHFPVETVVGSSLVA 237
VSA G++Q+K+ GKA +KV+SIFDS N+D + FPVETVVGS L A
Sbjct: 504 TVSASGVVQAKKSGKATVKVLSIFDSSNFDEVVIEVALPGSMMILPTFPVETVVGSYLQA 563
Query: 236 SVTLKASNGDHYFRCDAFSSAIRWNTESDSFRIVYTDRESFLLDEQEVPDLNVSLYGPPC 57
+V++++SNGD++++CDAF+S ++W ES+ F I R+ +LD E +L+ S YGPPC
Sbjct: 564 AVSMQSSNGDYFYQCDAFNSHVKWKVESEYFIIQNNTRKMPVLDVLEKVELSGSSYGPPC 623
Query: 56 AWARIYASGTCRTMLHAS 3
+WA +YASG+ RT+L A+
Sbjct: 624 SWASVYASGSGRTVLQAT 641
>ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
210-like [Cucumis sativus]
Length = 2257
Score = 219 bits (559), Expect = 2e-55
Identities = 108/198 (54%), Positives = 146/198 (73%), Gaps = 1/198 (0%)
Frame = -1
Query: 593 QEVMVCEQVKFSRDKRSG-SGSILLPWTPSVYQEVELKAAGGCAMSSSDYKWFSSDMSIV 417
QEV++CEQV+FS D RSG S +I LPWTPSVYQEV L+A GGCA +SSDYKWFSSD+S+V
Sbjct: 444 QEVVICEQVRFSLDNRSGVSRNIFLPWTPSVYQEVLLEATGGCAKTSSDYKWFSSDISVV 503
Query: 416 CVSAHGIIQSKRPGKAIIKVVSIFDSFNYDXXXXXXXXXXXXXXVQHFPVETVVGSSLVA 237
VS G++Q+K+ GKA +KV+SIFDS N+D + FPVETVVGS L A
Sbjct: 504 TVSVSGVVQAKKSGKATVKVLSIFDSSNFDEVVIEVALPGSMMILPTFPVETVVGSYLQA 563
Query: 236 SVTLKASNGDHYFRCDAFSSAIRWNTESDSFRIVYTDRESFLLDEQEVPDLNVSLYGPPC 57
+V++++SNGD++++CDAF+S ++W ES+ F I R+ +LD E +L+ S YGPPC
Sbjct: 564 AVSMQSSNGDYFYQCDAFNSHVKWKVESEYFIIQNNTRKMPVLDVLEKVELSGSSYGPPC 623
Query: 56 AWARIYASGTCRTMLHAS 3
+WA +YASG+ RT+L A+
Sbjct: 624 SWASVYASGSGRTVLQAT 641
>ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
gi|223539369|gb|EEF40960.1| RNA binding protein, putative
[Ricinus communis]
Length = 2256
Score = 213 bits (541), Expect = 3e-53
Identities = 107/198 (54%), Positives = 140/198 (70%), Gaps = 1/198 (0%)
Frame = -1
Query: 593 QEVMVCEQVKFSRDKRSG-SGSILLPWTPSVYQEVELKAAGGCAMSSSDYKWFSSDMSIV 417
QE++VC+QVKFS D+ S S +ILLPW P VYQEVEL A GGCA +SSDY+WFSSD +IV
Sbjct: 456 QEIIVCDQVKFSLDRTSSTSQNILLPWAPVVYQEVELSATGGCAKASSDYRWFSSDAAIV 515
Query: 416 CVSAHGIIQSKRPGKAIIKVVSIFDSFNYDXXXXXXXXXXXXXXVQHFPVETVVGSSLVA 237
VSA GI+Q+K+PG+A ++VVSIFD FNYD +Q+FPVETVVGS + A
Sbjct: 516 SVSASGIVQAKKPGQATVRVVSIFDPFNYDEVVVEVSVPSSIIMLQNFPVETVVGSHVYA 575
Query: 236 SVTLKASNGDHYFRCDAFSSAIRWNTESDSFRIVYTDRESFLLDEQEVPDLNVSLYGPPC 57
+VT+KASNG ++ CDAF S IRWN S+SF +V + +L +++ + + YG PC
Sbjct: 576 AVTMKASNGASFYSCDAFHSFIRWNAGSESFVVVNATEDPSVL--EKLGNAELHSYGAPC 633
Query: 56 AWARIYASGTCRTMLHAS 3
+W IYAS + TMLHA+
Sbjct: 634 SWTYIYASASGHTMLHAT 651