BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046017
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    44   9e-08
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    42   2e-06
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...    42   3e-06
gb|ABN09176.1| Polynucleotidyl transferase, Ribonuclease H fold ...    44   4e-06

>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 43.5 bits (101), Expect(2) = 9e-08
 Identities = 20/40 (50%), Positives = 25/40 (62%)
 Frame = +3

Query: 243 IKWVKPAMGTLKINVDAAIFEEEGRYSYCFVVRDYQGKLI 362
           I W  PA G LK NVDAAIF E+ R+     VRD +G+ +
Sbjct: 55  IAWQPPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFL 94



 Score = 38.5 bits (88), Expect(2) = 9e-08
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +2

Query: 482 DCLLAI*AIRSSGQMLSYTGNIVNDVRRLLSNSSNITLKFVKRSANKAAHFVA 640
           DC L + +I       +  G+I++D R LL   +N  + FV+R AN  AH  A
Sbjct: 135 DCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQFTNFKISFVRRQANVVAHSFA 187


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 41.6 bits (96), Expect(2) = 2e-06
 Identities = 19/41 (46%), Positives = 26/41 (63%)
 Frame = +3

Query: 246 KWVKPAMGTLKINVDAAIFEEEGRYSYCFVVRDYQGKLIAG 368
           KW KP  G +KINVD A+F ++G     F  RD+QG+ + G
Sbjct: 663 KWQKPDYGWIKINVDGAVFPDKGAIGAVF--RDHQGRFMGG 701



 Score = 36.2 bits (82), Expect(2) = 2e-06
 Identities = 20/58 (34%), Positives = 32/58 (55%)
 Frame = +2

Query: 482 DCLLAI*AIRSSGQMLSYTGNIVNDVRRLLSNSSNITLKFVKRSANKAAHFVAGFACS 655
           DCL  + AI+      +  G I+ D   +L +  ++ + + +RSAN AAH +A  ACS
Sbjct: 740 DCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDVQVVYARRSANSAAHCLANGACS 797


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538337|gb|EEF39944.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 483

 Score = 42.4 bits (98), Expect(3) = 3e-06
 Identities = 25/61 (40%), Positives = 31/61 (50%)
 Frame = +3

Query: 186 KARCIRDTGQEMPYQNEGQIKWVKPAMGTLKINVDAAIFEEEGRYSYCFVVRDYQGKLIA 365
           KAR + D  Q   +   G   W KPA G  K+NVDA+   E G+    FV+RD  G  I 
Sbjct: 322 KARKLTDYHQLGRHFAGGDCLWQKPATGKYKLNVDASSSAERGKSGASFVLRDNAGIWIT 381

Query: 366 G 368
           G
Sbjct: 382 G 382



 Score = 29.6 bits (65), Expect(3) = 3e-06
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = +2

Query: 482 DCLLAI*AIRSSGQMLSYTGNIVNDVRRLLSNSSNITLKFVKRSANKAAHFVAGFACS 655
           DCL  I  +       SY   ++ D + LL   +   L FV  SAN  AH ++   CS
Sbjct: 421 DCLRNIELLEEELHPNSYLLCLLKDCQDLLRVLNRCNLVFVYGSANTVAHMISKATCS 478



 Score = 23.9 bits (50), Expect(3) = 3e-06
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 412 ETMAIKEALSWAKRGGSINFEIE 480
           E  A+KEALSW    G    +IE
Sbjct: 397 EAWALKEALSWIHAKGMEEVQIE 419


>gb|ABN09176.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 260

 Score = 43.5 bits (101), Expect(2) = 4e-06
 Identities = 22/61 (36%), Positives = 38/61 (62%)
 Frame = +2

Query: 479 NDCLLAI*AIRSSGQMLSYTGNIVNDVRRLLSNSSNITLKFVKRSANKAAHFVAGFACSI 658
           +DC + + A+ SS    +  G+I+   ++LLS  +N +++FV+R ANK AH +A  + S 
Sbjct: 179 SDCKIVVDAVNSSVNPHNELGDIIFYCKQLLSLHANFSVRFVRRQANKVAHNIARASLSH 238

Query: 659 P 661
           P
Sbjct: 239 P 239



 Score = 33.1 bits (74), Expect(2) = 4e-06
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = +3

Query: 249 WVKPAMGTLKINVDAAIFEEEGRYSYCFVVRDYQGKLIAGHQFCKSGKVTP 401
           W KP +  +K NV+ A+F       Y    RD  G  + G    +  +VTP
Sbjct: 102 WEKPPLTVVKCNVECALFNNNSIMGYGLCFRDSMGHFLPGMSNYEFLRVTP 152