BLASTX nr result

ID: Cnidium21_contig00046003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046003
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517154.1| conserved hypothetical protein [Ricinus comm...    74   9e-12
ref|XP_002271997.1| PREDICTED: TVP38/TMEM64 family membrane prot...    69   5e-10
ref|NP_197408.2| SNARE associated Golgi family protein [Arabidop...    68   9e-10
ref|XP_002871857.1| hypothetical protein ARALYDRAFT_488790 [Arab...    68   9e-10
ref|XP_002280327.1| PREDICTED: TVP38/TMEM64 family membrane prot...    62   4e-08

>ref|XP_002517154.1| conserved hypothetical protein [Ricinus communis]
           gi|223543789|gb|EEF45317.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 302

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 33/74 (44%), Positives = 48/74 (64%)
 Frame = +2

Query: 170 LKPVFANDDDDDIHRRPWRRRXXXXXXXXXXXXXLRVSIFLLLVAAIVSACAFLPVEKVL 349
           LK   +  +D++   RPWRR+             LR+++  LL+AA+V AC  LPVEK+L
Sbjct: 3   LKQSISEYEDNEEECRPWRRKLSSTMASMTWGSALRITLLFLLIAAVVVACFTLPVEKIL 62

Query: 350 KNFLLWIKRDLGPW 391
           K+FLLW+++DLGPW
Sbjct: 63  KDFLLWVEQDLGPW 76


>ref|XP_002271997.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Vitis
           vinifera]
          Length = 373

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/81 (50%), Positives = 49/81 (60%)
 Frame = +2

Query: 149 LRARWSALKPVFANDDDDDIHRRPWRRRXXXXXXXXXXXXXLRVSIFLLLVAAIVSACAF 328
           LRAR S+LK   AN  D +    PWRRR              R+++ LL  AAI +AC  
Sbjct: 74  LRAR-SSLKQENANGIDAE-DSSPWRRRLSSMAWPSS----FRMALLLLFFAAISTACLT 127

Query: 329 LPVEKVLKNFLLWIKRDLGPW 391
           LP+EK+LK FLLWIKRDLGPW
Sbjct: 128 LPIEKILKGFLLWIKRDLGPW 148


>ref|NP_197408.2| SNARE associated Golgi family protein [Arabidopsis thaliana]
           gi|50201959|gb|AAT70495.1| At5g19070 [Arabidopsis
           thaliana] gi|58331785|gb|AAW70390.1| At5g19070
           [Arabidopsis thaliana] gi|110737737|dbj|BAF00807.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332005265|gb|AED92648.1| SNARE associated Golgi
           family protein [Arabidopsis thaliana]
          Length = 280

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/40 (72%), Positives = 37/40 (92%)
 Frame = +2

Query: 272 LRVSIFLLLVAAIVSACAFLPVEKVLKNFLLWIKRDLGPW 391
           LR+S+ L+LVAAIV AC FLPVEK+LK+FLLW+++DLGPW
Sbjct: 9   LRISVLLILVAAIVLACYFLPVEKLLKDFLLWVEQDLGPW 48


>ref|XP_002871857.1| hypothetical protein ARALYDRAFT_488790 [Arabidopsis lyrata subsp.
           lyrata] gi|297317694|gb|EFH48116.1| hypothetical protein
           ARALYDRAFT_488790 [Arabidopsis lyrata subsp. lyrata]
          Length = 280

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/40 (72%), Positives = 37/40 (92%)
 Frame = +2

Query: 272 LRVSIFLLLVAAIVSACAFLPVEKVLKNFLLWIKRDLGPW 391
           LR+S+ L+LVAAIV AC FLPVEK+LK+FLLW+++DLGPW
Sbjct: 9   LRISVLLILVAAIVLACYFLPVEKLLKDFLLWVEQDLGPW 48


>ref|XP_002280327.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Vitis
           vinifera] gi|297736982|emb|CBI26183.3| unnamed protein
           product [Vitis vinifera]
          Length = 274

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/40 (67%), Positives = 34/40 (85%)
 Frame = +2

Query: 272 LRVSIFLLLVAAIVSACAFLPVEKVLKNFLLWIKRDLGPW 391
           LR++  LLL+AAI  AC  LPVEK+LK+FLLWI++DLGPW
Sbjct: 9   LRITFLLLLIAAIAVACFTLPVEKILKDFLLWIEQDLGPW 48


Top