BLASTX nr result

ID: Cnidium21_contig00045980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045980
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3...   263   1e-68
ref|XP_002532346.1| gamma-tubulin complex component, putative [R...   261   5e-68
ref|XP_004161669.1| PREDICTED: LOW QUALITY PROTEIN: gamma-tubuli...   257   7e-67
ref|XP_004144694.1| PREDICTED: gamma-tubulin complex component 3...   257   7e-67
ref|XP_002322735.1| tubulin gamma complex-associated protein [Po...   257   9e-67

>ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3 homolog [Vitis
           vinifera]
          Length = 854

 Score =  263 bits (672), Expect = 1e-68
 Identities = 132/180 (73%), Positives = 151/180 (83%)
 Frame = +1

Query: 1   WDGGVLLVPKDPSNMREMAFREFGKLVKXXXXXXXXXIVRDVLYASQGIDGKVVKFDKSV 180
           W+ GVLLV KDP N+RE+A REF  LVK         +VRDVLYA QGIDGK VKFDKSV
Sbjct: 157 WNNGVLLVSKDPENIREIAVREFANLVKEENEVSEEVLVRDVLYACQGIDGKYVKFDKSV 216

Query: 181 DGYVVAELVRVPRATRIMVRKLCELGWLFRKVKGYVSETVKSLAAEDVGTVGQAFCAALQ 360
           DGY++ + ++VPRATRI V+KLCELGWLFRKVKGY+SE++    AEDVGTVGQAFCAALQ
Sbjct: 217 DGYLLRDSIKVPRATRITVQKLCELGWLFRKVKGYISESMDRFPAEDVGTVGQAFCAALQ 276

Query: 361 DELTEYYKLLAVLEAQSMNPIPIPSVTESVSSGNYLSLRRLSVWFAEPMVKMRLMALLVD 540
           DEL+ YYKLLAVLEAQSMNPIP+  V+E+ +SG YLSLRRLSVWFAEPMVKMRLMA+LVD
Sbjct: 277 DELSHYYKLLAVLEAQSMNPIPL--VSETANSGTYLSLRRLSVWFAEPMVKMRLMAVLVD 334


>ref|XP_002532346.1| gamma-tubulin complex component, putative [Ricinus communis]
           gi|223527963|gb|EEF30048.1| gamma-tubulin complex
           component, putative [Ricinus communis]
          Length = 855

 Score =  261 bits (667), Expect = 5e-68
 Identities = 130/180 (72%), Positives = 150/180 (83%)
 Frame = +1

Query: 1   WDGGVLLVPKDPSNMREMAFREFGKLVKXXXXXXXXXIVRDVLYASQGIDGKVVKFDKSV 180
           W+ GVLLV KDP N+RE AF+E+  LVK         +VRDVLYA QGIDG+ VKFD ++
Sbjct: 158 WNNGVLLVAKDPENLREFAFKEYVNLVKEESEVTEEVLVRDVLYACQGIDGRYVKFDANI 217

Query: 181 DGYVVAELVRVPRATRIMVRKLCELGWLFRKVKGYVSETVKSLAAEDVGTVGQAFCAALQ 360
           DGYV+ + V+VP ATR+MVRKLCELGWLFRKVKGY+SE++    AEDVGTVGQAFCAALQ
Sbjct: 218 DGYVLMDNVKVPTATRLMVRKLCELGWLFRKVKGYISESMDRFPAEDVGTVGQAFCAALQ 277

Query: 361 DELTEYYKLLAVLEAQSMNPIPIPSVTESVSSGNYLSLRRLSVWFAEPMVKMRLMALLVD 540
           DEL+EYYKLLAVLEAQSMNPIP+  ++E  SS NYLSLRRLSVWFAEPMVKMRLMA+LVD
Sbjct: 278 DELSEYYKLLAVLEAQSMNPIPL--ISEMASSSNYLSLRRLSVWFAEPMVKMRLMAVLVD 335


>ref|XP_004161669.1| PREDICTED: LOW QUALITY PROTEIN: gamma-tubulin complex component
           3-like [Cucumis sativus]
          Length = 846

 Score =  257 bits (657), Expect = 7e-67
 Identities = 126/180 (70%), Positives = 149/180 (82%)
 Frame = +1

Query: 1   WDGGVLLVPKDPSNMREMAFREFGKLVKXXXXXXXXXIVRDVLYASQGIDGKVVKFDKSV 180
           W  GVLLV KDP N+R++AF+EF  L+K         +VRDVLYA QGIDGK VKFD + 
Sbjct: 150 WQKGVLLVAKDPENLRDVAFKEFSNLLKEENEVTEEVLVRDVLYACQGIDGKYVKFDNNS 209

Query: 181 DGYVVAELVRVPRATRIMVRKLCELGWLFRKVKGYVSETVKSLAAEDVGTVGQAFCAALQ 360
           DGYV++ LV+  RATR MVRKLCE+GWLFRKVKGY+SE+++   AED+GTVG AFCAALQ
Sbjct: 210 DGYVLSNLVKASRATRTMVRKLCEMGWLFRKVKGYISESMERFPAEDIGTVGHAFCAALQ 269

Query: 361 DELTEYYKLLAVLEAQSMNPIPIPSVTESVSSGNYLSLRRLSVWFAEPMVKMRLMALLVD 540
           DEL+EYYKLLA+LEAQSMNPIP+  V+E+ SSGNYLSLRRL+VWFAEPM KMRLMA+LVD
Sbjct: 270 DELSEYYKLLAILEAQSMNPIPL--VSEAASSGNYLSLRRLAVWFAEPMAKMRLMAVLVD 327


>ref|XP_004144694.1| PREDICTED: gamma-tubulin complex component 3-like [Cucumis sativus]
          Length = 846

 Score =  257 bits (657), Expect = 7e-67
 Identities = 126/180 (70%), Positives = 149/180 (82%)
 Frame = +1

Query: 1   WDGGVLLVPKDPSNMREMAFREFGKLVKXXXXXXXXXIVRDVLYASQGIDGKVVKFDKSV 180
           W  GVLLV KDP N+R++AF+EF  L+K         +VRDVLYA QGIDGK VKFD + 
Sbjct: 150 WQKGVLLVAKDPENLRDVAFKEFSNLLKEENEVTEEVLVRDVLYACQGIDGKYVKFDNNS 209

Query: 181 DGYVVAELVRVPRATRIMVRKLCELGWLFRKVKGYVSETVKSLAAEDVGTVGQAFCAALQ 360
           DGYV++ LV+  RATR MVRKLCE+GWLFRKVKGY+SE+++   AED+GTVG AFCAALQ
Sbjct: 210 DGYVLSNLVKASRATRTMVRKLCEMGWLFRKVKGYISESMERFPAEDIGTVGHAFCAALQ 269

Query: 361 DELTEYYKLLAVLEAQSMNPIPIPSVTESVSSGNYLSLRRLSVWFAEPMVKMRLMALLVD 540
           DEL+EYYKLLA+LEAQSMNPIP+  V+E+ SSGNYLSLRRL+VWFAEPM KMRLMA+LVD
Sbjct: 270 DELSEYYKLLAILEAQSMNPIPL--VSEAASSGNYLSLRRLAVWFAEPMAKMRLMAVLVD 327


>ref|XP_002322735.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222867365|gb|EEF04496.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 844

 Score =  257 bits (656), Expect = 9e-67
 Identities = 128/180 (71%), Positives = 150/180 (83%)
 Frame = +1

Query: 1   WDGGVLLVPKDPSNMREMAFREFGKLVKXXXXXXXXXIVRDVLYASQGIDGKVVKFDKSV 180
           +D GVL V KDP N+RE+AFREF  L+K         +VRDVLYA QGIDGK VKFD +V
Sbjct: 160 YDKGVLFVTKDPENLREIAFREFVNLIKEENEVSEEVLVRDVLYACQGIDGKYVKFDANV 219

Query: 181 DGYVVAELVRVPRATRIMVRKLCELGWLFRKVKGYVSETVKSLAAEDVGTVGQAFCAALQ 360
           DGYV+ + ++VPR TR+MVRKLCELGWLFRKVKGY+SE++    AEDVGTVGQAFCAALQ
Sbjct: 220 DGYVLLDSIKVPRGTRVMVRKLCELGWLFRKVKGYISESMDRFPAEDVGTVGQAFCAALQ 279

Query: 361 DELTEYYKLLAVLEAQSMNPIPIPSVTESVSSGNYLSLRRLSVWFAEPMVKMRLMALLVD 540
           +EL +YYKLLAVLEAQ+MNPIP+  V+E+ SSGNYLSLRRL VWFAEP+VKMRLMA+LVD
Sbjct: 280 NELLDYYKLLAVLEAQAMNPIPL--VSETASSGNYLSLRRLLVWFAEPIVKMRLMAVLVD 337


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