BLASTX nr result

ID: Cnidium21_contig00045935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045935
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594394.1| F-box protein [Medicago truncatula] gi|35548...    60   2e-07
ref|XP_003606953.1| F-box protein [Medicago truncatula] gi|35550...    57   1e-06
ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine...    56   3e-06
ref|XP_003594237.1| F-box protein [Medicago truncatula] gi|35548...    56   4e-06
ref|XP_003594238.1| F-box protein [Medicago truncatula] gi|35548...    56   4e-06

>ref|XP_003594394.1| F-box protein [Medicago truncatula] gi|355483442|gb|AES64645.1|
           F-box protein [Medicago truncatula]
          Length = 418

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 40/122 (32%), Positives = 56/122 (45%), Gaps = 10/122 (8%)
 Frame = -2

Query: 344 FLSLFVMVYSLKTNSWTQIQDVPSNIYXXXXXXXXXXXXXXFASGTLHWMAIEYPS--GP 171
           F    V ++SLKTNSW  I ++P ++Y                S +LHW+A        P
Sbjct: 194 FYDPHVRLFSLKTNSWKVIPNLPYSLYYALTMGVFVEN-----SSSLHWVATRKVQLFQP 248

Query: 170 DVIVGFDLTLQQFKDVPFP--------PVKYGSNVIGNLGEYLSIKDYHDGRVDVWVMNY 15
           D+I+ F+LTL+ F +VP P           +   V    G    I DY D ++DVWVM  
Sbjct: 249 DLILAFNLTLETFNEVPLPDEIEEEVNSKSFKIRVAALGGCLCMIVDYKDTKIDVWVMKE 308

Query: 14  RG 9
            G
Sbjct: 309 YG 310


>ref|XP_003606953.1| F-box protein [Medicago truncatula] gi|355508008|gb|AES89150.1|
           F-box protein [Medicago truncatula]
          Length = 403

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
 Frame = -2

Query: 344 FLSLFVMVYSLKTNSWTQIQDVPSNIYXXXXXXXXXXXXXXFASGTLHWMAIE--YPSGP 171
           F    V ++SLKTNSW  I + P  +Y                S +LHW+A     P   
Sbjct: 188 FYDPHVRLFSLKTNSWKIIPNFPYALYYTRTMGVFVEN-----SSSLHWVASRKIQPFQS 242

Query: 170 DVIVGFDLTLQQFKDVPFPPVKYGSNV--------IGNLGEYLSIK-DYHDGRVDVWVMN 18
           D+I+ F+L+L+ F +VP P  + G  V        + +LG  L +  DY D ++DVWVM 
Sbjct: 243 DLILAFNLSLETFNEVPLPD-EIGEQVNSKSFKIRVADLGGCLCMTVDYKDTKIDVWVMK 301

Query: 17  YRG 9
             G
Sbjct: 302 EYG 304


>ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 385

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
 Frame = -2

Query: 329 VMVYSLKTNSWTQIQDVPSNIYXXXXXXXXXXXXXXFASGTLHWMAIE--YPSGPDVIVG 156
           V +Y+LK++SW  +  +P  +               F SG+LHW+      P  PD+IV 
Sbjct: 168 VQLYTLKSDSWKNLPSMPYAL-------CCARTMGVFVSGSLHWLVTRKLQPHEPDLIVS 220

Query: 155 FDLTLQQFKDVPFPPVKYG--SNVIGNLGEYLSIKDYHDGRVDVWVMNYRG 9
           FDLT + F +VP P    G     +  LG  L + ++     DVWVM   G
Sbjct: 221 FDLTRETFHEVPLPVTVNGDFDMQVALLGGCLCVVEHRGTGFDVWVMRVYG 271


>ref|XP_003594237.1| F-box protein [Medicago truncatula] gi|355483285|gb|AES64488.1|
           F-box protein [Medicago truncatula]
          Length = 391

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
 Frame = -2

Query: 329 VMVYSLKTNSWTQIQDVPSNIYXXXXXXXXXXXXXXFASGTLHWMAIEY--PSGPDVIVG 156
           V V+SLK NSW ++  +   +                 S +LHW+      P  PD+IV 
Sbjct: 170 VRVFSLKMNSWKELPSMNYALCCARTMGVFVEDSNNLNSNSLHWVVTRKLEPFQPDLIVA 229

Query: 155 FDLTLQQFKDVPFPPVKYGSNV-------IGNLGEYLS-IKDYHDGRVDVWVMNYRG 9
           F+LTL+ F +VP P +   +N        +  LG  LS I +Y   ++DVWVM   G
Sbjct: 230 FNLTLEIFNEVPLPEIGEVNNESESFEIDVAVLGGCLSMIVNYQTTQIDVWVMKEYG 286


>ref|XP_003594238.1| F-box protein [Medicago truncatula] gi|355483286|gb|AES64489.1|
           F-box protein [Medicago truncatula]
          Length = 398

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
 Frame = -2

Query: 329 VMVYSLKTNSWTQIQDVPSNIYXXXXXXXXXXXXXXFASGTLHWMAIEY--PSGPDVIVG 156
           V V+SLK NSW ++  +   +                 S +LHW+      P  PD+IV 
Sbjct: 170 VRVFSLKMNSWKELPSMNYALCCARTMGVFVEDSNNLNSNSLHWVVTRKLEPFQPDLIVA 229

Query: 155 FDLTLQQFKDVPFPPVKYGSNV-------IGNLGEYLS-IKDYHDGRVDVWVMNYRG 9
           F+LTL+ F +VP P +   +N        +  LG  LS I +Y   ++DVWVM   G
Sbjct: 230 FNLTLEIFNEVPLPEIGEVNNESESFEIDVAVLGGCLSMIVNYQTTQIDVWVMKEYG 286


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