BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045934
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containi...   202   2e-50
emb|CBI24939.3| unnamed protein product [Vitis vinifera]              202   2e-50
ref|XP_002517779.1| pentatricopeptide repeat-containing protein,...   167   1e-39
ref|XP_002313317.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
ref|NP_190885.5| tetratricopeptide repeat domain-containing prot...   160   8e-38

>ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g53170-like [Vitis vinifera]
          Length = 538

 Score =  202 bits (515), Expect = 2e-50
 Identities = 102/158 (64%), Positives = 126/158 (79%), Gaps = 1/158 (0%)
 Frame = -2

Query: 473 MEVKLMDPINLCWSSSF-VTPTTCSMKCLREHVKQPNPQIIVPKAAKKRVENSWHGLQKS 297
           ME  L+DP +L WSSS  +T TTCS+K L+E     NP  +  +A K+   +S +GLQ+ 
Sbjct: 1   MEPHLLDPTSLRWSSSIPLTYTTCSLKVLKETKPTSNPPFLFVRAGKRSSGSSQNGLQRQ 60

Query: 296 SKKNLAHILRTEAAIMGVEKKADSRKYTRLWPKAVLEALDNAIREKRWQSALKIFDLLRK 117
            KK+L+ ILRTEAAI G+E+KA+SRKY+ LWPKAVLEALD AIRE R++SALKIF LLRK
Sbjct: 61  PKKDLSRILRTEAAISGIERKANSRKYSTLWPKAVLEALDEAIRENRYESALKIFGLLRK 120

Query: 116 QHWYEPKGQTYSKLLVMLGKCRQPNQASLLFEIMLSEG 3
           QHWYEP+ QTY+KLL+MLGKC+QP QASLLFE+MLSEG
Sbjct: 121 QHWYEPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEG 158


>emb|CBI24939.3| unnamed protein product [Vitis vinifera]
          Length = 485

 Score =  202 bits (515), Expect = 2e-50
 Identities = 102/158 (64%), Positives = 126/158 (79%), Gaps = 1/158 (0%)
 Frame = -2

Query: 473 MEVKLMDPINLCWSSSF-VTPTTCSMKCLREHVKQPNPQIIVPKAAKKRVENSWHGLQKS 297
           ME  L+DP +L WSSS  +T TTCS+K L+E     NP  +  +A K+   +S +GLQ+ 
Sbjct: 1   MEPHLLDPTSLRWSSSIPLTYTTCSLKVLKETKPTSNPPFLFVRAGKRSSGSSQNGLQRQ 60

Query: 296 SKKNLAHILRTEAAIMGVEKKADSRKYTRLWPKAVLEALDNAIREKRWQSALKIFDLLRK 117
            KK+L+ ILRTEAAI G+E+KA+SRKY+ LWPKAVLEALD AIRE R++SALKIF LLRK
Sbjct: 61  PKKDLSRILRTEAAISGIERKANSRKYSTLWPKAVLEALDEAIRENRYESALKIFGLLRK 120

Query: 116 QHWYEPKGQTYSKLLVMLGKCRQPNQASLLFEIMLSEG 3
           QHWYEP+ QTY+KLL+MLGKC+QP QASLLFE+MLSEG
Sbjct: 121 QHWYEPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEG 158


>ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543051|gb|EEF44586.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score =  167 bits (422), Expect = 1e-39
 Identities = 85/149 (57%), Positives = 110/149 (73%), Gaps = 1/149 (0%)
 Frame = -2

Query: 446 NLCWSSSFVTPTTCSM-KCLREHVKQPNPQIIVPKAAKKRVENSWHGLQKSSKKNLAHIL 270
           NL WS S  TP T  + K L+E     +P I+   ++    +    G ++ +KK L+  L
Sbjct: 10  NLYWSYSISTPPTIHLIKVLKERNFHSDPPILGIHSSNLSSDLIPVGPKRHTKKELSRFL 69

Query: 269 RTEAAIMGVEKKADSRKYTRLWPKAVLEALDNAIREKRWQSALKIFDLLRKQHWYEPKGQ 90
           RT+AAI  +E+KADS KY RLWPKAVLEALD+AI+E+RW+SALKIF+LLRKQHWYEP+ Q
Sbjct: 70  RTDAAIKAIEQKADSSKYNRLWPKAVLEALDDAIKERRWKSALKIFELLRKQHWYEPRCQ 129

Query: 89  TYSKLLVMLGKCRQPNQASLLFEIMLSEG 3
           TY+KLL+MLGKCRQP +A LLFE+M +EG
Sbjct: 130 TYTKLLMMLGKCRQPEEARLLFEVMQTEG 158


>ref|XP_002313317.1| predicted protein [Populus trichocarpa] gi|222849725|gb|EEE87272.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  167 bits (422), Expect = 1e-39
 Identities = 83/147 (56%), Positives = 109/147 (74%)
 Frame = -2

Query: 443 LCWSSSFVTPTTCSMKCLREHVKQPNPQIIVPKAAKKRVENSWHGLQKSSKKNLAHILRT 264
           + WS S  TP   S   L       +PQ +  +++K   + +  GLQ+ SKK L+ ILRT
Sbjct: 1   MSWSLSISTPP--SKNLLTGSNGNQDPQFLTIQSSKWCPDPTSTGLQRQSKKELSRILRT 58

Query: 263 EAAIMGVEKKADSRKYTRLWPKAVLEALDNAIREKRWQSALKIFDLLRKQHWYEPKGQTY 84
           EAAI  +E+KA+S+KY  LWPKAVLEALD+AI+E +W+SALKIF+LLRKQHWYEP+ +TY
Sbjct: 59  EAAIKAIEQKANSKKYNNLWPKAVLEALDDAIKENQWESALKIFELLRKQHWYEPRTKTY 118

Query: 83  SKLLVMLGKCRQPNQASLLFEIMLSEG 3
           +KLL+MLGKCRQP + S LFE+MLS+G
Sbjct: 119 TKLLMMLGKCRQPEEGSFLFEVMLSDG 145


>ref|NP_190885.5| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana] gi|332645523|gb|AEE79044.1| tetratricopeptide
           repeat domain-containing protein [Arabidopsis thaliana]
          Length = 499

 Score =  160 bits (406), Expect = 8e-38
 Identities = 81/146 (55%), Positives = 102/146 (69%)
 Frame = -2

Query: 440 CWSSSFVTPTTCSMKCLREHVKQPNPQIIVPKAAKKRVENSWHGLQKSSKKNLAHILRTE 261
           C  +  +TPT CS K   E  ++ N  +I  +             Q   KK L+ ILRT+
Sbjct: 41  CIPTISITPTMCSTKVPNERTEKMNSGLISTRH------------QVDPKKELSRILRTD 88

Query: 260 AAIMGVEKKADSRKYTRLWPKAVLEALDNAIREKRWQSALKIFDLLRKQHWYEPKGQTYS 81
           AA+ G+E+KA+S KY  LWPKAVLEALD AI+E RWQSALKIF+LLRKQHWYEP+ +TY+
Sbjct: 89  AAVKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYT 148

Query: 80  KLLVMLGKCRQPNQASLLFEIMLSEG 3
           KL  +LG C+QP+QASLLFE+MLSEG
Sbjct: 149 KLFKVLGNCKQPDQASLLFEVMLSEG 174