BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045926
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containi...   191   5e-47
emb|CBI15095.3| unnamed protein product [Vitis vinifera]              191   5e-47
ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp....   182   2e-44
ref|XP_002321560.1| predicted protein [Populus trichocarpa] gi|2...   181   4e-44
ref|XP_002511467.1| pentatricopeptide repeat-containing protein,...   180   9e-44

>ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Vitis vinifera]
          Length = 450

 Score =  191 bits (485), Expect = 5e-47
 Identities = 89/110 (80%), Positives = 102/110 (92%)
 Frame = -2

Query: 330 GFFRAGQVKEAWEFFLEMKKRKCEIDVVTYTTVVHGLGVVGEVKRARKVFDEMIDAGVLP 151
           GFFRAGQ+KEAWEFFL+MKKRKCEIDVVTYTTVVHG GV GEV++A++VF+EMI  GVLP
Sbjct: 208 GFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLP 267

Query: 150 SVATYNAFIQILCKKDCVENATSVFDEMVKKGYVPNSTTYGVLIRGWCHV 1
           SVATYNAFIQ+LCKKD VENA SVF+EM++KGY+PNSTTY V+IRG CHV
Sbjct: 268 SVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHV 317



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
 Frame = -2

Query: 330 GFFRAGQVKEAWEFFLEMKKRKCEIDVVTYTTVVHGLGVVGEVKRARKVFDEMIDAGVLP 151
           G    G++++A EF   MK  +CE +V  Y  V+       E+++   VF++M DA  LP
Sbjct: 313 GLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLP 372

Query: 150 SVATYNAFIQILC---KKDCVENATSVFDEMVKKGYVPNSTTYGVLIRG 13
           ++ TYN  I  +    K D +  A  +  EMV++G++P   T+  ++ G
Sbjct: 373 NLDTYNILISAMFVRKKSDYLLTAGKLLIEMVERGFLPRKFTFNRVLDG 421


>emb|CBI15095.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  191 bits (485), Expect = 5e-47
 Identities = 89/110 (80%), Positives = 102/110 (92%)
 Frame = -2

Query: 330 GFFRAGQVKEAWEFFLEMKKRKCEIDVVTYTTVVHGLGVVGEVKRARKVFDEMIDAGVLP 151
           GFFRAGQ+KEAWEFFL+MKKRKCEIDVVTYTTVVHG GV GEV++A++VF+EMI  GVLP
Sbjct: 200 GFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLP 259

Query: 150 SVATYNAFIQILCKKDCVENATSVFDEMVKKGYVPNSTTYGVLIRGWCHV 1
           SVATYNAFIQ+LCKKD VENA SVF+EM++KGY+PNSTTY V+IRG CHV
Sbjct: 260 SVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHV 309



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
 Frame = -2

Query: 330 GFFRAGQVKEAWEFFLEMKKRKCEIDVVTYTTVVHGLGVVGEVKRARKVFDEMIDAGVLP 151
           G    G++++A EF   MK  +CE +V  Y  V+       E+++   VF++M DA  LP
Sbjct: 305 GLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLP 364

Query: 150 SVATYNAFIQILC---KKDCVENATSVFDEMVKKGY 52
           ++ TYN  I  +    K D +  A  +  EMV++G+
Sbjct: 365 NLDTYNILISAMFVRKKSDYLLTAGKLLIEMVERGF 400


>ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333405|gb|EFH63823.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 451

 Score =  182 bits (462), Expect = 2e-44
 Identities = 86/109 (78%), Positives = 94/109 (86%)
 Frame = -2

Query: 330 GFFRAGQVKEAWEFFLEMKKRKCEIDVVTYTTVVHGLGVVGEVKRARKVFDEMIDAGVLP 151
           GFFRAGQ+++AWEFFLEMKKR CEIDVVTYTTVVHG GV GE+KR R VFDEMI  GVLP
Sbjct: 237 GFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLP 296

Query: 150 SVATYNAFIQILCKKDCVENATSVFDEMVKKGYVPNSTTYGVLIRGWCH 4
           SVATYNAFIQ+LCKKD VENA  +F+EMV+KGY PN TTY VLIRG  H
Sbjct: 297 SVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFH 345



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/104 (28%), Positives = 56/104 (53%)
 Frame = -2

Query: 321 RAGQVKEAWEFFLEMKKRKCEIDVVTYTTVVHGLGVVGEVKRARKVFDEMIDAGVLPSVA 142
           ++ +V++A+E F  ++ R    D VTY  +V+G  ++    +A +V  EM+D G+ P++ 
Sbjct: 171 KSKRVEKAYELFRALRGR-FSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLT 229

Query: 141 TYNAFIQILCKKDCVENATSVFDEMVKKGYVPNSTTYGVLIRGW 10
           TYN  +Q   +   +  A   F EM K+    +  TY  ++ G+
Sbjct: 230 TYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGF 273


>ref|XP_002321560.1| predicted protein [Populus trichocarpa] gi|222868556|gb|EEF05687.1|
           predicted protein [Populus trichocarpa]
          Length = 491

 Score =  181 bits (460), Expect = 4e-44
 Identities = 82/109 (75%), Positives = 95/109 (87%)
 Frame = -2

Query: 330 GFFRAGQVKEAWEFFLEMKKRKCEIDVVTYTTVVHGLGVVGEVKRARKVFDEMIDAGVLP 151
           G+FRAGQ+ EAW+FFLEMKKR CEIDV+TYTTV+HG GV GE+KRARKVFD M+  GVLP
Sbjct: 249 GYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLP 308

Query: 150 SVATYNAFIQILCKKDCVENATSVFDEMVKKGYVPNSTTYGVLIRGWCH 4
           SVATYNAFIQ+LCKKD V+NA  +F+EMV KGYVPNS TY ++IRG CH
Sbjct: 309 SVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCH 357



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
 Frame = -2

Query: 330 GFFRAGQVKEAWEFFLEMKKRKCEIDVVTYTTVVHGLGVVGEVKRARKVFDEMIDAGVLP 151
           G    G+++ A EF   MK   CE +V TY  V+      GE+ +A  +F +M     LP
Sbjct: 354 GLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLP 413

Query: 150 SVATYNAFIQILC---KKDCVENATSVFDEMVKKGYVPNSTTYGVLIRG 13
           ++ TYN  I  +    K D +  A ++  EMV +G+VP   T+  ++ G
Sbjct: 414 NLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNG 462



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/97 (34%), Positives = 49/97 (50%)
 Frame = -2

Query: 309 VKEAWEFFLEMKKRKCEIDVVTYTTVVHGLGVVGEVKRARKVFDEMIDAGVLPSVATYNA 130
           V  A   F EM  +    + +TY  V+ GL   GE++RA +    M D G  P+V TYN 
Sbjct: 326 VDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNL 385

Query: 129 FIQILCKKDCVENATSVFDEMVKKGYVPNSTTYGVLI 19
            I+  C +  ++ A  +F +M     +PN  TY +LI
Sbjct: 386 VIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILI 422


>ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550582|gb|EEF52069.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 482

 Score =  180 bits (457), Expect = 9e-44
 Identities = 83/110 (75%), Positives = 97/110 (88%)
 Frame = -2

Query: 330 GFFRAGQVKEAWEFFLEMKKRKCEIDVVTYTTVVHGLGVVGEVKRARKVFDEMIDAGVLP 151
           G+FRAGQ  EAW FFLEMKKRKC+IDVVTYT+V+HGLGVVGE+KRAR VF++M+  GVLP
Sbjct: 240 GYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLP 299

Query: 150 SVATYNAFIQILCKKDCVENATSVFDEMVKKGYVPNSTTYGVLIRGWCHV 1
           SVAT+NA IQILCKKD VENA  +F+EMVK+GYVPNS TY ++IRG CHV
Sbjct: 300 SVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHV 349



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/97 (36%), Positives = 51/97 (52%)
 Frame = -2

Query: 309 VKEAWEFFLEMKKRKCEIDVVTYTTVVHGLGVVGEVKRARKVFDEMIDAGVLPSVATYNA 130
           V+ A   F EM KR    + +TY  V+ GL  VGE++RA ++ + M D    P+V TYN 
Sbjct: 317 VENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNI 376

Query: 129 FIQILCKKDCVENATSVFDEMVKKGYVPNSTTYGVLI 19
            I+  C    +E    +F +M     +PN  TY +LI
Sbjct: 377 LIRYFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILI 413