BLASTX nr result
ID: Cnidium21_contig00045911
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00045911
(441 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002314675.1| predicted protein [Populus trichocarpa] gi|2... 205 4e-51
ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containi... 196 2e-48
ref|XP_003610748.1| Pentatricopeptide repeat-containing protein ... 188 5e-46
ref|XP_002885518.1| pentatricopeptide repeat-containing protein ... 183 1e-44
ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containi... 182 2e-44
>ref|XP_002314675.1| predicted protein [Populus trichocarpa] gi|222863715|gb|EEF00846.1|
predicted protein [Populus trichocarpa]
Length = 845
Score = 205 bits (521), Expect = 4e-51
Identities = 96/147 (65%), Positives = 125/147 (85%)
Frame = +1
Query: 1 ILSNYVHQGLAREVVPVLNDMLRQGLKPDRITMLSVISAAVELENYLYGKECHGYILRNG 180
I+SNYV QGLAREV+ VL +ML+ G +PDRITMLS +SA EL++ GK CHGY+LRNG
Sbjct: 312 IMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNG 371
Query: 181 LEGCDSISNSLINMYMKCGKKEVACMIFDRMVNKTVVSYNSLIAGLIRNDDVDLARKLFS 360
LEG D++ N++INMYMKCGK+E+AC +FDRM+NKT VS+NSLIAG +RN D++ A K+FS
Sbjct: 372 LEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFS 431
Query: 361 EMPETNLVSWNTILAALVQESLFEEAI 441
MP+++LVSWNT++ ALVQES+F+EAI
Sbjct: 432 AMPDSDLVSWNTMIGALVQESMFKEAI 458
Score = 73.2 bits (178), Expect = 2e-11
Identities = 40/124 (32%), Positives = 73/124 (58%)
Frame = +1
Query: 1 ILSNYVHQGLAREVVPVLNDMLRQGLKPDRITMLSVISAAVELENYLYGKECHGYILRNG 180
++ Y +G +E V + +M+ G++P+ +TM+ VISA +L++ G++ I
Sbjct: 211 LIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELE 270
Query: 181 LEGCDSISNSLINMYMKCGKKEVACMIFDRMVNKTVVSYNSLIAGLIRNDDVDLARKLFS 360
LE + N+L++MYMKCG + A IFD V+K +V YN++++ +R LAR++ +
Sbjct: 271 LEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQ---GLAREVLA 327
Query: 361 EMPE 372
+ E
Sbjct: 328 VLGE 331
Score = 67.8 bits (164), Expect = 9e-10
Identities = 39/119 (32%), Positives = 59/119 (49%)
Frame = +1
Query: 25 GLAREVVPVLNDMLRQGLKPDRITMLSVISAAVELENYLYGKECHGYILRNGLEGCDSIS 204
GL + + V ++ G PD T V+SA + G + HG I++ G E +
Sbjct: 118 GLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVE 177
Query: 205 NSLINMYMKCGKKEVACMIFDRMVNKTVVSYNSLIAGLIRNDDVDLARKLFSEMPETNL 381
NSLI+ Y +CG+ + +FD+M + VVS+ SLI G + A LF EM E +
Sbjct: 178 NSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGI 236
Score = 61.6 bits (148), Expect = 6e-08
Identities = 33/133 (24%), Positives = 66/133 (49%)
Frame = +1
Query: 16 VHQGLAREVVPVLNDMLRQGLKPDRITMLSVISAAVELENYLYGKECHGYILRNGLEGCD 195
V + + +E + + M +G+ D++TM+ V SA L K HGYI + +
Sbjct: 449 VQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDM 508
Query: 196 SISNSLINMYMKCGKKEVACMIFDRMVNKTVVSYNSLIAGLIRNDDVDLARKLFSEMPET 375
+ +L++M+ +CG + A +F++MV + V ++ + I + + A +LF EM +
Sbjct: 509 HLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQ 568
Query: 376 NLVSWNTILAALV 414
+ + AL+
Sbjct: 569 GIKPDGVVFVALL 581
>ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 196 bits (498), Expect = 2e-48
Identities = 92/147 (62%), Positives = 120/147 (81%)
Frame = +1
Query: 1 ILSNYVHQGLAREVVPVLNDMLRQGLKPDRITMLSVISAAVELENYLYGKECHGYILRNG 180
ILSNY QGLARE + +L++ML+QG +PDR+TMLS ISA+ +L + YGK CHGY++RNG
Sbjct: 304 ILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNG 363
Query: 181 LEGCDSISNSLINMYMKCGKKEVACMIFDRMVNKTVVSYNSLIAGLIRNDDVDLARKLFS 360
LEG DSI N +I+MYMKCGK E+AC +FD M NKTVVS+NSL AG IRN DV+ A ++F+
Sbjct: 364 LEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFN 423
Query: 361 EMPETNLVSWNTILAALVQESLFEEAI 441
++PE N V WNT+++ LVQ+SLFE+AI
Sbjct: 424 QIPERNAVFWNTMISGLVQKSLFEDAI 450
Score = 72.8 bits (177), Expect = 3e-11
Identities = 42/127 (33%), Positives = 64/127 (50%)
Frame = +1
Query: 1 ILSNYVHQGLAREVVPVLNDMLRQGLKPDRITMLSVISAAVELENYLYGKECHGYILRNG 180
++ Y GL RE + + ML G+ P+ T V+S ++ + G + HG +++ G
Sbjct: 102 LIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMG 161
Query: 181 LEGCDSISNSLINMYMKCGKKEVACMIFDRMVNKTVVSYNSLIAGLIRNDDVDLARKLFS 360
LE I N LI+ Y +CG + +F+ M + VVS+ SLI G R D A LF
Sbjct: 162 LEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFF 221
Query: 361 EMPETNL 381
EM E +
Sbjct: 222 EMVEAGI 228
Score = 70.1 bits (170), Expect = 2e-10
Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 4/143 (2%)
Frame = +1
Query: 1 ILSNYVHQGLAREVVPVLNDMLRQGLKPDRITMLSVISAAVELENYLYGKECHGYILRNG 180
++ Y +E V + +M+ G++P +TM+ VISA +L + G+ YI G
Sbjct: 203 LICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELG 262
Query: 181 LEGCDSISNSLINMYMKCGKKEVACMIFDRMVNKTVVSYNSLIAGLIRNDDVDLARKLFS 360
L+ + N+L++MYMKCG + A +FD V++ +V YN++++ R A +
Sbjct: 263 LKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILD 322
Query: 361 EM----PETNLVSWNTILAALVQ 417
EM P + V+ + ++A Q
Sbjct: 323 EMLQQGPRPDRVTMLSAISASAQ 345
Score = 64.3 bits (155), Expect = 1e-08
Identities = 32/122 (26%), Positives = 66/122 (54%)
Frame = +1
Query: 1 ILSNYVHQGLAREVVPVLNDMLRQGLKPDRITMLSVISAAVELENYLYGKECHGYILRNG 180
++S V + L + + + +M +G+K DR+TM+ + SA L K H YI +NG
Sbjct: 436 MISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNG 495
Query: 181 LEGCDSISNSLINMYMKCGKKEVACMIFDRMVNKTVVSYNSLIAGLIRNDDVDLARKLFS 360
+ ++ +L++M+ +CG + A +F++M + V ++ + I + + + A LF+
Sbjct: 496 IPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFN 555
Query: 361 EM 366
+M
Sbjct: 556 QM 557
>ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 828
Score = 188 bits (477), Expect = 5e-46
Identities = 87/147 (59%), Positives = 120/147 (81%)
Frame = +1
Query: 1 ILSNYVHQGLAREVVPVLNDMLRQGLKPDRITMLSVISAAVELENYLYGKECHGYILRNG 180
I+SNYV GLA EV+ VL++ML++G +PD++TMLS I+A +L + GK H Y+ RNG
Sbjct: 295 IMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNG 354
Query: 181 LEGCDSISNSLINMYMKCGKKEVACMIFDRMVNKTVVSYNSLIAGLIRNDDVDLARKLFS 360
LE D+ISN++I+MYMKCGK+E AC +FD M NKTVV++NSLIAGL+R+ +++LA ++F
Sbjct: 355 LERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFG 414
Query: 361 EMPETNLVSWNTILAALVQESLFEEAI 441
EMPE+NLVSWNT++ A+VQ S+FEEAI
Sbjct: 415 EMPESNLVSWNTMIGAMVQASMFEEAI 441
Score = 68.2 bits (165), Expect = 7e-10
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 1/128 (0%)
Frame = +1
Query: 1 ILSNYVHQGLAREVVPV-LNDMLRQGLKPDRITMLSVISAAVELENYLYGKECHGYILRN 177
++ Y GL +E + + L+ ++ G+ PD T ++SA ++ + G + HG +++
Sbjct: 92 LIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKM 151
Query: 178 GLEGCDSISNSLINMYMKCGKKEVACMIFDRMVNKTVVSYNSLIAGLIRNDDVDLARKLF 357
GL ++NSLI+ Y CGK ++ +FD M+ + VVS+ SLI G + A LF
Sbjct: 152 GLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLF 211
Query: 358 SEMPETNL 381
EM E +
Sbjct: 212 FEMVEVGV 219
Score = 65.9 bits (159), Expect = 3e-09
Identities = 31/109 (28%), Positives = 64/109 (58%)
Frame = +1
Query: 1 ILSNYVHQGLAREVVPVLNDMLRQGLKPDRITMLSVISAAVELENYLYGKECHGYILRNG 180
+++ Y +A+E V + +M+ G++P+ +TM+ ISA +L++ GK+ + G
Sbjct: 194 LINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELG 253
Query: 181 LEGCDSISNSLINMYMKCGKKEVACMIFDRMVNKTVVSYNSLIAGLIRN 327
++ + N+L++MYMKCG IFD +K +V YN++++ +++
Sbjct: 254 VKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQH 302
Score = 55.8 bits (133), Expect = 4e-06
Identities = 34/133 (25%), Positives = 66/133 (49%)
Frame = +1
Query: 16 VHQGLAREVVPVLNDMLRQGLKPDRITMLSVISAAVELENYLYGKECHGYILRNGLEGCD 195
V + E + +L +M QG+K DR+TM+ + SA L K + YI +N +
Sbjct: 432 VQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDM 491
Query: 196 SISNSLINMYMKCGKKEVACMIFDRMVNKTVVSYNSLIAGLIRNDDVDLARKLFSEMPET 375
+ +L++M+ +CG A +F+ M + V ++ + I + A +LF EM +
Sbjct: 492 QLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQ 551
Query: 376 NLVSWNTILAALV 414
++ + + + AL+
Sbjct: 552 DVKADDFVFVALL 564
>ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297331358|gb|EFH61777.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 904
Score = 183 bits (465), Expect = 1e-44
Identities = 86/145 (59%), Positives = 115/145 (79%)
Frame = +1
Query: 7 SNYVHQGLAREVVPVLNDMLRQGLKPDRITMLSVISAAVELENYLYGKECHGYILRNGLE 186
SNYV QGL +E + VLN M+ G++PDRI+MLS IS+ +L N L+GK CHGY+LRNG E
Sbjct: 309 SNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 368
Query: 187 GCDSISNSLINMYMKCGKKEVACMIFDRMVNKTVVSYNSLIAGLIRNDDVDLARKLFSEM 366
D+I N+LI+MYMKC +++ A IFDRM NKTVV++NS++AG I N +VD A + F+ M
Sbjct: 369 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTM 428
Query: 367 PETNLVSWNTILAALVQESLFEEAI 441
PE N+VSWNTI++ALVQE+++EEAI
Sbjct: 429 PEKNIVSWNTIISALVQENMYEEAI 453
Score = 66.2 bits (160), Expect = 3e-09
Identities = 38/138 (27%), Positives = 65/138 (47%)
Frame = +1
Query: 1 ILSNYVHQGLAREVVPVLNDMLRQGLKPDRITMLSVISAAVELENYLYGKECHGYILRNG 180
++ Y GL +E + + M+ G+ PD+ T +S + + G + HG I++
Sbjct: 104 LIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMD 163
Query: 181 LEGCDSISNSLINMYMKCGKKEVACMIFDRMVNKTVVSYNSLIAGLIRNDDVDLARKLFS 360
+ NSL++ Y +CG+ + A +FD M + VVS+ S+I G R + A LF
Sbjct: 164 YAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFF 223
Query: 361 EMPETNLVSWNTILAALV 414
M V N++ V
Sbjct: 224 RMVRDEDVIPNSVTMVCV 241
Score = 57.0 bits (136), Expect = 2e-06
Identities = 30/109 (27%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Frame = +1
Query: 1 ILSNYVHQGLAREVVPVLNDMLR-QGLKPDRITMLSVISAAVELENYLYGKECHGYILRN 177
++ Y + A++ V + M+R + + P+ +TM+ VISA +LE+ G++ + +I +
Sbjct: 205 MICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDS 264
Query: 178 GLEGCDSISNSLINMYMKCGKKEVACMIFDRMVNKTVVSYNSLIAGLIR 324
G+E D + ++L++MYMKC ++A +FD + N++ + +R
Sbjct: 265 GIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVR 313
>ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 182 bits (462), Expect = 2e-44
Identities = 85/147 (57%), Positives = 119/147 (80%)
Frame = +1
Query: 1 ILSNYVHQGLAREVVPVLNDMLRQGLKPDRITMLSVISAAVELENYLYGKECHGYILRNG 180
I+SNYVH A +V+ +L++ML++G +PD++TMLS I+A +L + GK H Y+LRNG
Sbjct: 303 IMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNG 362
Query: 181 LEGCDSISNSLINMYMKCGKKEVACMIFDRMVNKTVVSYNSLIAGLIRNDDVDLARKLFS 360
LEG D+ISN++I+MYMKCGK+E AC +F+ M NKTVV++NSLIAGL+R+ D++LA ++F
Sbjct: 363 LEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFD 422
Query: 361 EMPETNLVSWNTILAALVQESLFEEAI 441
EM E +LVSWNT++ ALVQ S+FEEAI
Sbjct: 423 EMLERDLVSWNTMIGALVQVSMFEEAI 449
Score = 78.2 bits (191), Expect = 7e-13
Identities = 44/127 (34%), Positives = 69/127 (54%)
Frame = +1
Query: 1 ILSNYVHQGLAREVVPVLNDMLRQGLKPDRITMLSVISAAVELENYLYGKECHGYILRNG 180
++ Y GL + + + ML G+ PD+ T ++SA ++ G + HG +L+ G
Sbjct: 101 LIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMG 160
Query: 181 LEGCDSISNSLINMYMKCGKKEVACMIFDRMVNKTVVSYNSLIAGLIRNDDVDLARKLFS 360
LEG +SNSLI+ Y +CGK ++ +FD M+ + VVS+ SLI G D A LF
Sbjct: 161 LEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFF 220
Query: 361 EMPETNL 381
+M E +
Sbjct: 221 QMGEAGV 227
Score = 76.6 bits (187), Expect = 2e-12
Identities = 44/143 (30%), Positives = 78/143 (54%), Gaps = 4/143 (2%)
Frame = +1
Query: 1 ILSNYVHQGLAREVVPVLNDMLRQGLKPDRITMLSVISAAVELENYLYGKECHGYILRNG 180
+++ Y + L++E V + M G++P+ +TM+ VISA +L++ GK+ YI G
Sbjct: 202 LINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELG 261
Query: 181 LEGCDSISNSLINMYMKCGKKEVACMIFDRMVNKTVVSYNSLIAGLIRNDDVDLARKLFS 360
+E + N+L++MYMKCG A IFD NK +V YN++++ + ++ +
Sbjct: 262 MELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILD 321
Query: 361 EM----PETNLVSWNTILAALVQ 417
EM P + V+ + +AA Q
Sbjct: 322 EMLQKGPRPDKVTMLSTIAACAQ 344
Score = 57.0 bits (136), Expect = 2e-06
Identities = 34/133 (25%), Positives = 64/133 (48%)
Frame = +1
Query: 16 VHQGLAREVVPVLNDMLRQGLKPDRITMLSVISAAVELENYLYGKECHGYILRNGLEGCD 195
V + E + + +M QG+ DR+TM+ + SA L K YI +N +
Sbjct: 440 VQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDL 499
Query: 196 SISNSLINMYMKCGKKEVACMIFDRMVNKTVVSYNSLIAGLIRNDDVDLARKLFSEMPET 375
+ +L++M+ +CG A +F RM + V ++ + I + + + A +LF+EM E
Sbjct: 500 QLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQ 559
Query: 376 NLVSWNTILAALV 414
+ + + AL+
Sbjct: 560 KVKPDDVVFVALL 572