BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045869
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518234.1| pentatricopeptide repeat-containing protein,...    85   7e-15
ref|XP_003634559.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13
emb|CAN75781.1| hypothetical protein VITISV_012425 [Vitis vinifera]    81   1e-13
gb|ABD28636.1| Tetratricopeptide-like helical [Medicago truncatula]    73   3e-11
ref|XP_003595043.1| Pentatricopeptide repeat-containing protein ...    73   3e-11

>ref|XP_002518234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223542581|gb|EEF44120.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 932

 Score = 85.1 bits (209), Expect = 7e-15
 Identities = 51/125 (40%), Positives = 77/125 (61%)
 Frame = +1

Query: 1    VIDLLKVVESKFKTESMERLLSFLCDQGRIQEANTVLNEVASMFFPLEKFEAQSISKSFV 180
            V++LL  V ++ +TES+E  L FLC++G I+EA  VLNE+ S+FFP++K+ + S S+S  
Sbjct: 807  VMELLNKVNTEVETESIESFLLFLCEKGSIKEAVAVLNEIGSLFFPVQKWSSPSESQSLQ 866

Query: 181  SQCSISNDETYLELETYNEVELDKVVQRHNYLDKESQQKDFDSYCDLITLFCSRGELQKA 360
            S          L L + +  E+D+VV+  + L  ES+   F SY  +I   CS+GEL +A
Sbjct: 867  S--------ANLSLASCDATEVDEVVETSDDLG-ESKFNCFASYYSVIASLCSKGELGEA 917

Query: 361  NNLAK 375
            N  AK
Sbjct: 918  NRFAK 922


>ref|XP_003634559.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
            mitochondrial-like [Vitis vinifera]
          Length = 993

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 14/148 (9%)
 Frame = +1

Query: 1    VIDLLKVVESKFKTESMERLLSFLCDQGRIQEANTVLNEVASMFFPL------------- 141
            V++L+  V+++ +TES+E  +  LC+QG IQEA TVLNEV S+FFP+             
Sbjct: 846  VLELINRVDTEIETESVESFIISLCEQGSIQEAVTVLNEVGSIFFPIGRRCRPQNRAEKE 905

Query: 142  EKFEAQSISKSFVSQCSISNDETYLELETYNEVELDKVVQRHNYLDKESQQKDFDSYCDL 321
            EK        +  S+ S  N +  L++   N  +++ VV  ++  +K S+  DF+SY  L
Sbjct: 906  EKIYEGVTFGAVSSKHSSLNHKMDLDVGLSNVKKVEMVVDDYDNSEKGSRVPDFESYYSL 965

Query: 322  ITLFCSRGELQKANNLAKVLTCSVG-GC 402
            I   CSRGEL +AN   + +   +  GC
Sbjct: 966  IASLCSRGELLEANRKTRQMLLDMDTGC 993


>emb|CAN75781.1| hypothetical protein VITISV_012425 [Vitis vinifera]
          Length = 993

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 14/148 (9%)
 Frame = +1

Query: 1    VIDLLKVVESKFKTESMERLLSFLCDQGRIQEANTVLNEVASMFFPL------------- 141
            V++L+  V+++ +TES+E  +  LC+QG IQEA TVLNEV S+FFP+             
Sbjct: 846  VLELINRVDTEIETESVESFIISLCEQGSIQEAVTVLNEVGSIFFPIGRRCRPQNRAEKE 905

Query: 142  EKFEAQSISKSFVSQCSISNDETYLELETYNEVELDKVVQRHNYLDKESQQKDFDSYCDL 321
            EK        +  S+ S  N +  L++   N  +++ VV  ++  +K S+  DF+SY  L
Sbjct: 906  EKIYEGVTFGAVSSKHSSLNHKMDLDVGLSNVKKVEMVVDDYDNSEKGSRVPDFESYYSL 965

Query: 322  ITLFCSRGELQKANNLAKVLTCSVG-GC 402
            I   CSRGEL +AN   + +   +  GC
Sbjct: 966  IASLCSRGELLEANRKTRQMLLDMDTGC 993


>gb|ABD28636.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1053

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 14/139 (10%)
 Frame = +1

Query: 1    VIDLLKVVESKFKTESMERLLSFLCDQGRIQEANTVLNEVASMFFPLEKFEA---QSISK 171
            V +++ +V S+  TES+   ++ LCDQGRIQEA  VLN +AS FFP ++      Q   K
Sbjct: 904  VAEMINIVNSRVDTESICDFIAALCDQGRIQEAVKVLNLIASEFFPAQRSSTCNNQGSDK 963

Query: 172  SFVSQCSIS-NDETYLELETYNEVELD----KVVQRHNYLD------KESQQKDFDSYCD 318
            S  S  S+    ++   L +Y E  LD        + N++       K+S+ ++FD Y  
Sbjct: 964  SHKSYESVDIGSKSSTSLLSYCESGLDFESCDTRDKRNHMTNNDSHLKKSRLRNFDFYYS 1023

Query: 319  LITLFCSRGELQKANNLAK 375
             I   C++G+LQ AN LAK
Sbjct: 1024 RIAALCTKGDLQDANELAK 1042


>ref|XP_003595043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355484091|gb|AES65294.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1070

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 14/139 (10%)
 Frame = +1

Query: 1    VIDLLKVVESKFKTESMERLLSFLCDQGRIQEANTVLNEVASMFFPLEKFEA---QSISK 171
            V +++ +V S+  TES+   ++ LCDQGRIQEA  VLN +AS FFP ++      Q   K
Sbjct: 921  VAEMINIVNSRVDTESICDFIAALCDQGRIQEAVKVLNLIASEFFPAQRSSTCNNQGSDK 980

Query: 172  SFVSQCSIS-NDETYLELETYNEVELD----KVVQRHNYLD------KESQQKDFDSYCD 318
            S  S  S+    ++   L +Y E  LD        + N++       K+S+ ++FD Y  
Sbjct: 981  SHKSYESVDIGSKSSTSLLSYCESGLDFESCDTRDKRNHMTNNDSHLKKSRLRNFDFYYS 1040

Query: 319  LITLFCSRGELQKANNLAK 375
             I   C++G+LQ AN LAK
Sbjct: 1041 RIAALCTKGDLQDANELAK 1059