BLASTX nr result

ID: Cnidium21_contig00045847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045847
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304877.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002325232.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    63   3e-08
ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    62   5e-08
ref|XP_002319190.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07

>ref|XP_002304877.1| predicted protein [Populus trichocarpa] gi|222842309|gb|EEE79856.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
 Frame = -3

Query: 267 VGLVFDPLKSPHYKVIAFLYAYGSKNVGDFQIYSSETETWRVSV--QSFIVAPGLNFTDG 94
           + LVFDPL+SP Y+V+   +      +    +YSSET+ W++SV  ++F +   +NFTDG
Sbjct: 178 IQLVFDPLESPRYRVVCIQFFNSELKI---YVYSSETKDWKLSVKLENFDLL-SVNFTDG 233

Query: 93  VYWNGCVHWLN 61
           V WNG VHW++
Sbjct: 234 VSWNGAVHWMS 244


>ref|XP_002325232.1| predicted protein [Populus trichocarpa] gi|222866666|gb|EEF03797.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/70 (40%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
 Frame = -3

Query: 267 VGLVFDPLKSPHYKVIAFLYAYGSKNVGDFQIYSSETETWRVSV-QSFIVAPGLNFTDGV 91
           + LVFDP KSP+YKV+   Y    K++ +  +YSSET+ W++S+ Q    +  ++  +GV
Sbjct: 176 IQLVFDPSKSPYYKVLCIHY---FKSLLEIHVYSSETKIWKLSLKQENFDSSSVDLNNGV 232

Query: 90  YWNGCVHWLN 61
           +WNG +HW++
Sbjct: 233 FWNGAIHWIS 242


>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/72 (43%), Positives = 41/72 (56%)
 Frame = -3

Query: 276 VMYVGLVFDPLKSPHYKVIAFLYAYGSKNVGDFQIYSSETETWRVSVQSFIVAPGLNFTD 97
           V  + L FDP KSP+Y VI       S +    +IYSS T  WR+S + F     + F D
Sbjct: 170 VFGINLAFDPSKSPYYSVICVRSCEVSISHYQIEIYSSGTGDWRLSGKPFRAPFDMVFYD 229

Query: 96  GVYWNGCVHWLN 61
           GV+WNG VHW++
Sbjct: 230 GVFWNGAVHWIS 241


>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/72 (43%), Positives = 39/72 (54%)
 Frame = -3

Query: 276 VMYVGLVFDPLKSPHYKVIAFLYAYGSKNVGDFQIYSSETETWRVSVQSFIVAPGLNFTD 97
           V+ V L FDP KS  YKV+       S +    QI S ET  WRVS   F     ++F  
Sbjct: 144 VLGVNLAFDPSKSHTYKVVCVQRCKSSYDHCQIQISSLETGPWRVSGVPFAAPISVDFPS 203

Query: 96  GVYWNGCVHWLN 61
           GVYWNG +HW++
Sbjct: 204 GVYWNGAIHWIS 215


>ref|XP_002319190.1| predicted protein [Populus trichocarpa] gi|222857566|gb|EEE95113.1|
           predicted protein [Populus trichocarpa]
          Length = 405

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
 Frame = -3

Query: 267 VGLVFDPLKSPHYKVIAFLYAYGSKNVGDFQIYSSETETWRVSVQSFIVAPGLNFTDGVY 88
           + L FDPL SP+YKV+       SK      +YSSETE+W +    F +  G+ +++GV+
Sbjct: 169 LSLAFDPLISPYYKVVCICKGNSSKQNFQIDVYSSETESWSLLPILFEMPLGMTYSNGVF 228

Query: 87  WNGCVHWLNV--------LDKKSVPK 34
            +G VHW +         +D +SV K
Sbjct: 229 LDGSVHWYSYAETSLYFHIDSQSVKK 254


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