BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045792
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containi...   227   7e-58
ref|NP_178260.1| pentatricopeptide repeat-containing protein [Ar...   205   4e-51
ref|XP_002876755.1| pentatricopeptide repeat-containing protein ...   197   1e-48
dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]    179   2e-43
ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat...   177   8e-43

>ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial [Vitis vinifera]
           gi|297737690|emb|CBI26891.3| unnamed protein product
           [Vitis vinifera]
          Length = 610

 Score =  227 bits (579), Expect = 7e-58
 Identities = 101/154 (65%), Positives = 127/154 (82%)
 Frame = +2

Query: 2   WSCVAKVRHKMRKKGVKKVAAYSSIEYNGQIHILYAGDRWHPQTARIYKNLKELIEKLKT 181
           W CV KVR +M+KKG +KVAAYSS+E+NG+IHILY GD+ HPQ+A I   L++L++++K+
Sbjct: 457 WHCVEKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSASILAKLEDLLKQMKS 516

Query: 182 WGYSPKADSILHDVDMEEREETLSTHSEKLAIIFGLINIEGQMPIRVMKNLRTCDDCHTF 361
            GY P+ DS+ HDV+ EE+E TLSTHSEKLAI F LIN   + PIRVMKNLR C DCHTF
Sbjct: 517 MGYIPETDSVFHDVEDEEKESTLSTHSEKLAIAFSLINGSPKFPIRVMKNLRICGDCHTF 576

Query: 362 AKMVSKMTMREIILRDKSRFHHFKHGFCSCNDFW 463
            K+VS++TMREII+RDK+RFHHFK+G CSC DFW
Sbjct: 577 CKLVSRITMREIIMRDKNRFHHFKNGICSCKDFW 610


>ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g01510, mitochondrial; Flags: Precursor
           gi|3785980|gb|AAC67327.1| hypothetical protein
           [Arabidopsis thaliana] gi|330250369|gb|AEC05463.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 584

 Score =  205 bits (521), Expect = 4e-51
 Identities = 94/154 (61%), Positives = 116/154 (75%)
 Frame = +2

Query: 2   WSCVAKVRHKMRKKGVKKVAAYSSIEYNGQIHILYAGDRWHPQTARIYKNLKELIEKLKT 181
           W CV KVR KMRK G KKVAAYSS+E+ G+IH    GD+ HPQ+  IY+ L E+++K++ 
Sbjct: 431 WDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRK 490

Query: 182 WGYSPKADSILHDVDMEEREETLSTHSEKLAIIFGLINIEGQMPIRVMKNLRTCDDCHTF 361
            GY P   S+ HDV+MEE+E +LS HSEKLAI FGLI      PIRVMKNLRTCDDCH F
Sbjct: 491 MGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAF 550

Query: 362 AKMVSKMTMREIILRDKSRFHHFKHGFCSCNDFW 463
           +K VS +T  EII+RDK+RFHHF++G CSC +FW
Sbjct: 551 SKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584


>ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322593|gb|EFH53014.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 597

 Score =  197 bits (500), Expect = 1e-48
 Identities = 91/146 (62%), Positives = 113/146 (77%)
 Frame = +2

Query: 2   WSCVAKVRHKMRKKGVKKVAAYSSIEYNGQIHILYAGDRWHPQTARIYKNLKELIEKLKT 181
           W CV KVR KMRK G KKVAAYSS+E++G+IH    GD  HPQ+  IY+ L E+++K++ 
Sbjct: 431 WDCVDKVRSKMRKLGTKKVAAYSSVEFDGKIHFFNRGDISHPQSKAIYEKLDEILKKIRN 490

Query: 182 WGYSPKADSILHDVDMEEREETLSTHSEKLAIIFGLINIEGQMPIRVMKNLRTCDDCHTF 361
            GY P   S+ HDV+MEE+E +LS HSEKLAI FGLIN     PIRVMKNLRTCDDCH F
Sbjct: 491 MGYVPDTGSVFHDVEMEEKESSLSHHSEKLAIAFGLINGRAGHPIRVMKNLRTCDDCHVF 550

Query: 362 AKMVSKMTMREIILRDKSRFHHFKHG 439
           +K VS++T REII+RDK+RFHHF++G
Sbjct: 551 SKFVSRLTSREIIMRDKNRFHHFRNG 576


>dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 742

 Score =  179 bits (455), Expect = 2e-43
 Identities = 81/154 (52%), Positives = 108/154 (70%)
 Frame = +2

Query: 2    WSCVAKVRHKMRKKGVKKVAAYSSIEYNGQIHILYAGDRWHPQTARIYKNLKELIEKLKT 181
            W   +K+R  M K+GVKK A YSSI   GQ+H    GDR HPQ A I   ++E+  +LK+
Sbjct: 589  WEDASKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEIVVMMEEIGRRLKS 648

Query: 182  WGYSPKADSILHDVDMEEREETLSTHSEKLAIIFGLINIEGQMPIRVMKNLRTCDDCHTF 361
             GYSP    I  DVD EE+E+ L  HSEKLAI FGL+++   +P+ ++KNLR C+DCH+ 
Sbjct: 649  AGYSPITSQITVDVDEEEKEQALLAHSEKLAIAFGLVSLAPNLPVHIIKNLRVCEDCHSA 708

Query: 362  AKMVSKMTMREIILRDKSRFHHFKHGFCSCNDFW 463
             K++S++  REII+RD+SRFHHF+ G CSCNDFW
Sbjct: 709  IKLISRLWNREIIVRDRSRFHHFRGGVCSCNDFW 742


>ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  177 bits (449), Expect = 8e-43
 Identities = 78/154 (50%), Positives = 107/154 (69%)
 Frame = +2

Query: 2   WSCVAKVRHKMRKKGVKKVAAYSSIEYNGQIHILYAGDRWHPQTARIYKNLKELIEKLKT 181
           W  V  VR+ M+K G+KKV   S++E NGQ+H   AGD++HPQ   IY  L  L+ K+K 
Sbjct: 525 WKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKE 584

Query: 182 WGYSPKADSILHDVDMEEREETLSTHSEKLAIIFGLINIEGQMPIRVMKNLRTCDDCHTF 361
            GY P+ +S LHDV++E++E  L+ HSEKLAI+F ++N +   PIR+ KNLR C DCH  
Sbjct: 585 LGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIA 644

Query: 362 AKMVSKMTMREIILRDKSRFHHFKHGFCSCNDFW 463
            K++SK+  R II+RD +RFHHF +G CSC D+W
Sbjct: 645 IKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678