BLASTX nr result

ID: Cnidium21_contig00045758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045758
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    70   2e-10
ref|XP_004150633.1| PREDICTED: uncharacterized protein LOC101216...    63   3e-08
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    62   5e-08
emb|CAN79493.1| hypothetical protein VITISV_033374 [Vitis vinifera]    61   8e-08
ref|XP_004171978.1| PREDICTED: LOW QUALITY PROTEIN: serine/threo...    59   5e-07

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
 Frame = -3

Query: 306  EVLVQWKRLPSYKAT*EDMDTFNQQFPTFHLEDKVRLWGRGIVTDQ-APPKLLTYS-RNK 133
            E L++WK LP+++AT EDM   + +FP+FHLEDKV +WG GIV  Q   P L+TY  R  
Sbjct: 1560 ECLIKWKGLPAFEATWEDMSPIHLRFPSFHLEDKVNVWGAGIVMHQLKKPNLITYKRRGN 1619

Query: 132  KKGR 121
            KKG+
Sbjct: 1620 KKGQ 1623


>ref|XP_004150633.1| PREDICTED: uncharacterized protein LOC101216195 [Cucumis sativus]
          Length = 922

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/64 (56%), Positives = 43/64 (67%)
 Frame = -3

Query: 306  EVLVQWKRLPSYKAT*EDMDTFNQQFPTFHLEDKVRLWGRGIVTDQAPPKLLTYSRNKKK 127
            E LV+WK LP  +AT E +   NQQFPTFHLEDKV L  RGIV    PP + TY   ++K
Sbjct: 856  EWLVKWKELPENEATWEAVYQMNQQFPTFHLEDKVNLEPRGIV---RPPIIHTY---RRK 909

Query: 126  GRRV 115
            GR+V
Sbjct: 910  GRKV 913


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
 Frame = -3

Query: 306  EVLVQWKRLPSYKAT*EDMDTFNQQFPTFHLEDKVRLWGRGIV---TDQAPPKLLTYSRN 136
            EVL++W  LP+++AT ED   FN +FP FHLEDKV  W   I    T   PP + TYSR 
Sbjct: 1493 EVLIKWLNLPAFEATWEDAALFNARFPDFHLEDKVLNWEGSIAKSPTRIIPPIVHTYSRR 1552

Query: 135  KKK 127
            +KK
Sbjct: 1553 RKK 1555


>emb|CAN79493.1| hypothetical protein VITISV_033374 [Vitis vinifera]
          Length = 455

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/67 (46%), Positives = 39/67 (58%)
 Frame = -3

Query: 321 TTVRLEVLVQWKRLPSYKAT*EDMDTFNQQFPTFHLEDKVRLWGRGIVTDQAPPKLLTYS 142
           +T  +EVLVQWK LP ++AT E   T   QFP FHL DKV +W  G   +  PP   TY+
Sbjct: 392 STSVIEVLVQWKDLPDFEATWESFATIQNQFPEFHLVDKVVVWEEG---NDKPPVRFTYA 448

Query: 141 RNKKKGR 121
           R  K  +
Sbjct: 449 RRAKNNQ 455


>ref|XP_004171978.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein
           phosphatase 4 regulatory subunit 3-like [Cucumis
           sativus]
          Length = 813

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/60 (50%), Positives = 37/60 (61%)
 Frame = -3

Query: 306 EVLVQWKRLPSYKAT*EDMDTFNQQFPTFHLEDKVRLWGRGIVTDQAPPKLLTYSRNKKK 127
           EVL+ W+ LP ++AT E  D F Q FP FHLEDKV+L   G V    PP +  YSR K +
Sbjct: 272 EVLINWEGLPHHEATWEGYDDFQQSFPDFHLEDKVKLDREGTV---RPPIIRQYSRRKNR 328


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