BLASTX nr result

ID: Cnidium21_contig00045719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045719
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    54   1e-05

>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
 Frame = +1

Query: 13  QKSRVKWLSLGDGNNSFFFNQT*ANWENNKILAIQNATGELTFGHSNVAQIAVRFFTDSI 192
           QK+R++WLSLGD N S+F          NK+L++    GE+  GH  V    + +F   +
Sbjct: 321 QKARIQWLSLGDQNTSYFHKSVNGRHNRNKLLSLTREDGEVVEGHEAVKSEVIAYFHRVL 380

Query: 193 GTNSTTAPCNFEDLSC---VSITHDQASHLEDPVTPDLILKTLKTMKKNKS 336
           G +      N E +     + ++  Q   L   VT   I   + ++K NK+
Sbjct: 381 GVDQMPRVLNEEVMESAINLKLSSTQQHVLAQVVTRKEIKHAMFSLKNNKA 431


Top