BLASTX nr result

ID: Cnidium21_contig00045715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045715
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vit...   148   4e-34
emb|CBI40718.3| unnamed protein product [Vitis vinifera]              148   4e-34
ref|XP_004157117.1| PREDICTED: niemann-Pick C1 protein-like [Cuc...   147   9e-34
ref|XP_004145542.1| PREDICTED: niemann-Pick C1 protein-like [Cuc...   147   9e-34
ref|XP_002307793.1| cholesterol transport protein [Populus trich...   140   1e-31

>ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vitis vinifera]
          Length = 1309

 Score =  148 bits (374), Expect = 4e-34
 Identities = 72/102 (70%), Positives = 79/102 (77%)
 Frame = +2

Query: 5   QMLEDAPQIRNGVRLSIVQGYMSKFYRRYGTWVARNPVFXXXXXXXXXXXXXXGLIRFEV 184
           QMLED PQIRNGV+LSIVQGYMS FYRRYGTWVAR+P                GLIRF+V
Sbjct: 362 QMLEDVPQIRNGVQLSIVQGYMSNFYRRYGTWVARHPTIMLCSSLAIVLVLCLGLIRFKV 421

Query: 185 ETRPEKLWVGHRSRALQEKDFFDSHLAPFYRIEQLIIATKPD 310
           ETRPEKLWVG  S+A +EK FFDSHLAPFYRIEQL++AT PD
Sbjct: 422 ETRPEKLWVGPGSKAAEEKQFFDSHLAPFYRIEQLVLATIPD 463


>emb|CBI40718.3| unnamed protein product [Vitis vinifera]
          Length = 1242

 Score =  148 bits (374), Expect = 4e-34
 Identities = 72/102 (70%), Positives = 79/102 (77%)
 Frame = +2

Query: 5   QMLEDAPQIRNGVRLSIVQGYMSKFYRRYGTWVARNPVFXXXXXXXXXXXXXXGLIRFEV 184
           QMLED PQIRNGV+LSIVQGYMS FYRRYGTWVAR+P                GLIRF+V
Sbjct: 295 QMLEDVPQIRNGVQLSIVQGYMSNFYRRYGTWVARHPTIMLCSSLAIVLVLCLGLIRFKV 354

Query: 185 ETRPEKLWVGHRSRALQEKDFFDSHLAPFYRIEQLIIATKPD 310
           ETRPEKLWVG  S+A +EK FFDSHLAPFYRIEQL++AT PD
Sbjct: 355 ETRPEKLWVGPGSKAAEEKQFFDSHLAPFYRIEQLVLATIPD 396


>ref|XP_004157117.1| PREDICTED: niemann-Pick C1 protein-like [Cucumis sativus]
          Length = 1296

 Score =  147 bits (371), Expect = 9e-34
 Identities = 70/103 (67%), Positives = 81/103 (78%)
 Frame = +2

Query: 2   MQMLEDAPQIRNGVRLSIVQGYMSKFYRRYGTWVARNPVFXXXXXXXXXXXXXXGLIRFE 181
           MQMLEDAPQIR+ ++LS+VQGYMS FYR+YGTWVARNP                GL+RF+
Sbjct: 345 MQMLEDAPQIRSRIQLSVVQGYMSNFYRKYGTWVARNPTLVLISSLAIVLLLCIGLLRFK 404

Query: 182 VETRPEKLWVGHRSRALQEKDFFDSHLAPFYRIEQLIIATKPD 310
           VETRP+KLWVG  S+A QEK+FFDSHLAPFYRIEQ+IIAT PD
Sbjct: 405 VETRPDKLWVGPGSKASQEKEFFDSHLAPFYRIEQIIIATVPD 447


>ref|XP_004145542.1| PREDICTED: niemann-Pick C1 protein-like [Cucumis sativus]
          Length = 1244

 Score =  147 bits (371), Expect = 9e-34
 Identities = 70/103 (67%), Positives = 81/103 (78%)
 Frame = +2

Query: 2   MQMLEDAPQIRNGVRLSIVQGYMSKFYRRYGTWVARNPVFXXXXXXXXXXXXXXGLIRFE 181
           MQMLEDAPQIR+ ++LS+VQGYMS FYR+YGTWVARNP                GL+RF+
Sbjct: 294 MQMLEDAPQIRSRIQLSVVQGYMSNFYRKYGTWVARNPTLVLISSLAIVLLLCIGLLRFK 353

Query: 182 VETRPEKLWVGHRSRALQEKDFFDSHLAPFYRIEQLIIATKPD 310
           VETRP+KLWVG  S+A QEK+FFDSHLAPFYRIEQ+IIAT PD
Sbjct: 354 VETRPDKLWVGPGSKASQEKEFFDSHLAPFYRIEQIIIATVPD 396


>ref|XP_002307793.1| cholesterol transport protein [Populus trichocarpa]
           gi|222857242|gb|EEE94789.1| cholesterol transport
           protein [Populus trichocarpa]
          Length = 1274

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/102 (66%), Positives = 78/102 (76%)
 Frame = +2

Query: 5   QMLEDAPQIRNGVRLSIVQGYMSKFYRRYGTWVARNPVFXXXXXXXXXXXXXXGLIRFEV 184
           QM+ED+PQ  + V+LSIVQGYMSKFYRRYGTWVARNP+               GLIRF+V
Sbjct: 323 QMVEDSPQTGSRVQLSIVQGYMSKFYRRYGTWVARNPILVLSLSLAVILLLCVGLIRFKV 382

Query: 185 ETRPEKLWVGHRSRALQEKDFFDSHLAPFYRIEQLIIATKPD 310
           ETRPEKLWVG  S+  +EK FFD+HLAPFYRIEQLI+AT PD
Sbjct: 383 ETRPEKLWVGPGSKVAEEKRFFDTHLAPFYRIEQLILATVPD 424


Top