BLASTX nr result

ID: Cnidium21_contig00045685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045685
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143374.1| PREDICTED: protein ROS1-like [Cucumis sativus]    112   2e-23
gb|AEC12445.1| DNA N-glycosylase/DNA-(apurinic or apyrimidinic s...   109   2e-22
ref|XP_004164145.1| PREDICTED: transcriptional activator DEMETER...   108   6e-22
ref|XP_004150492.1| PREDICTED: transcriptional activator DEMETER...   108   6e-22
emb|CBI30244.3| unnamed protein product [Vitis vinifera]              107   8e-22

>ref|XP_004143374.1| PREDICTED: protein ROS1-like [Cucumis sativus]
          Length = 1782

 Score =  112 bits (281), Expect = 2e-23
 Identities = 61/133 (45%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
 Frame = +3

Query: 57   SIVPYEGXXXXXXXXXXXXXXXXVDLDEESERAWLKLMDNNYEQ---GSED--EEYWERE 221
            SIVP+EG                VDLDEE+ R W  LMDN+ ++   GS++  +++WE E
Sbjct: 715  SIVPFEGALDPIKKRRRFAK---VDLDEETVRVWKLLMDNSNKELVEGSDEAKDKWWEEE 771

Query: 222  RQTMINRARITISILARLQGNRSFSKWKGSVMDSIIGTYLTQNVTDHLSSSAFMDLAARY 401
            R     R    I+ +  +QG+R FS+WKGSV+DS+IG +LTQNV+DHLSSSAFM LAARY
Sbjct: 772  RSVFSGRTDSFIAKMHLIQGDRGFSQWKGSVLDSVIGVFLTQNVSDHLSSSAFMSLAARY 831

Query: 402  PVRDSKRSNKSLE 440
            P++       S++
Sbjct: 832  PLKSKSLHESSVD 844


>gb|AEC12445.1| DNA N-glycosylase/DNA-(apurinic or apyrimidinic site) lyase
            [Gossypium hirsutum]
          Length = 2055

 Score =  109 bits (273), Expect = 2e-22
 Identities = 58/131 (44%), Positives = 83/131 (63%), Gaps = 2/131 (1%)
 Frame = +3

Query: 57   SIVPYEGXXXXXXXXXXXXXXXXVDLDEESERAWLKLMDNNYE--QGSEDEEYWERERQT 230
            ++VP+EG                VDLD E+ R W  LM    E  +G++ E++WE ER+ 
Sbjct: 1002 TVVPFEGFESIKKKVRPR-----VDLDPETNRVWNLLMGKEGEDTEGTDKEKWWEEERRV 1056

Query: 231  MINRARITISILARLQGNRSFSKWKGSVMDSIIGTYLTQNVTDHLSSSAFMDLAARYPVR 410
               R    I+ +  +QG+R FSKWKGSV+DS+IG +LTQNV+DHLSSSAFM LAA++P++
Sbjct: 1057 FHGRVDSFIARMHLVQGDRRFSKWKGSVVDSVIGVFLTQNVSDHLSSSAFMSLAAKFPLK 1116

Query: 411  DSKRSNKSLER 443
             S + + + ER
Sbjct: 1117 SSCKGDCNAER 1127


>ref|XP_004164145.1| PREDICTED: transcriptional activator DEMETER-like [Cucumis sativus]
          Length = 1736

 Score =  108 bits (269), Expect = 6e-22
 Identities = 63/152 (41%), Positives = 86/152 (56%), Gaps = 15/152 (9%)
 Frame = +3

Query: 6    IHHKYDQLVVRDQSIGA-----SIVPYEGXXXXXXXXXXXXXXXX-----VDLDEESERA 155
            I HK  +L + D  +       +IVPY+G                     VD+D E+ER 
Sbjct: 655  ILHKMKRLSLNDHEVSIRSEQNAIVPYKGNGAVVPYVESEYLRKRKARPRVDIDPETERI 714

Query: 156  WLKLMDNNYEQGSED-----EEYWERERQTMINRARITISILARLQGNRSFSKWKGSVMD 320
            W  LM     +G E      E++WE ER+    RA   I+ +  +QG+R FS+WKGSV+D
Sbjct: 715  WNLLMGKEGSEGIESHEKDKEKWWEEERKVFRGRADSFIARMHLVQGDRRFSRWKGSVVD 774

Query: 321  SIIGTYLTQNVTDHLSSSAFMDLAARYPVRDS 416
            S+IG +LTQNV+DHLSSSAFM LAAR+PV+ +
Sbjct: 775  SVIGVFLTQNVSDHLSSSAFMSLAARFPVKSA 806


>ref|XP_004150492.1| PREDICTED: transcriptional activator DEMETER-like [Cucumis sativus]
          Length = 1679

 Score =  108 bits (269), Expect = 6e-22
 Identities = 63/152 (41%), Positives = 86/152 (56%), Gaps = 15/152 (9%)
 Frame = +3

Query: 6    IHHKYDQLVVRDQSIGA-----SIVPYEGXXXXXXXXXXXXXXXX-----VDLDEESERA 155
            I HK  +L + D  +       +IVPY+G                     VD+D E+ER 
Sbjct: 598  ILHKMKRLSLNDHEVSIRSEQNAIVPYKGNGAVVPYVESEYLRKRKARPRVDIDPETERI 657

Query: 156  WLKLMDNNYEQGSED-----EEYWERERQTMINRARITISILARLQGNRSFSKWKGSVMD 320
            W  LM     +G E      E++WE ER+    RA   I+ +  +QG+R FS+WKGSV+D
Sbjct: 658  WNLLMGKEGSEGIESHEKDKEKWWEEERKVFRGRADSFIARMHLVQGDRRFSRWKGSVVD 717

Query: 321  SIIGTYLTQNVTDHLSSSAFMDLAARYPVRDS 416
            S+IG +LTQNV+DHLSSSAFM LAAR+PV+ +
Sbjct: 718  SVIGVFLTQNVSDHLSSSAFMSLAARFPVKSA 749


>emb|CBI30244.3| unnamed protein product [Vitis vinifera]
          Length = 1470

 Score =  107 bits (268), Expect = 8e-22
 Identities = 57/110 (51%), Positives = 74/110 (67%), Gaps = 5/110 (4%)
 Frame = +3

Query: 126 VDLDEESERAWLKLMDNNYEQGSE--DEE---YWERERQTMINRARITISILARLQGNRS 290
           VDLDEE+ R W  LM N   +G +  DEE   +WE ER     RA   I+ +  +QG+R 
Sbjct: 620 VDLDEETSRVWKLLMGNINSEGIDGTDEEKAKWWEEERNVFRGRADSFIARMHLVQGDRR 679

Query: 291 FSKWKGSVMDSIIGTYLTQNVTDHLSSSAFMDLAARYPVRDSKRSNKSLE 440
           FSKWKGSV+DS++G +LTQNV+DHLSSSAFM LAA +P + + R +  LE
Sbjct: 680 FSKWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAAHFPCKCNHRPSTELE 729


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