BLASTX nr result

ID: Cnidium21_contig00045666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045666
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74874.1| hypothetical protein VITISV_038921 [Vitis vinifera]    82   6e-14
ref|NP_189195.1| leucine-rich repeat-containing protein [Arabido...    79   3e-13
ref|NP_564942.1| leucine-rich repeats-ribonuclease inhibitor dom...    76   3e-12
ref|XP_002888681.1| leucine-rich repeat family protein [Arabidop...    75   4e-12
ref|XP_002876925.1| predicted protein [Arabidopsis lyrata subsp....    75   7e-12

>emb|CAN74874.1| hypothetical protein VITISV_038921 [Vitis vinifera]
          Length = 584

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/64 (62%), Positives = 48/64 (75%), Gaps = 3/64 (4%)
 Frame = +1

Query: 184 VLIFIFCMSVVFCNGE---EAEPLGALMEKREQEALYSVIQGFVGKSWNGSDLYPDPWCW 354
           +++FI C+ V +C+G+   E  P+ A MEK EQEALYS IQGFVG  WNGSDLYPDP  W
Sbjct: 12  LVLFILCLGV-YCDGDGDTEMAPMVAPMEKTEQEALYSTIQGFVGTWWNGSDLYPDPCGW 70

Query: 355 TPIQ 366
           TPIQ
Sbjct: 71  TPIQ 74


>ref|NP_189195.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
           gi|332643528|gb|AEE77049.1| leucine-rich
           repeat-containing protein [Arabidopsis thaliana]
          Length = 475

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/64 (60%), Positives = 44/64 (68%), Gaps = 4/64 (6%)
 Frame = +1

Query: 187 LIFIFCMSVVFCNGEEAEPLG----ALMEKREQEALYSVIQGFVGKSWNGSDLYPDPWCW 354
           L+   C++++ C   E  P G    A MEK EQEALYS IQGFVG SWNGSDLYPDP  W
Sbjct: 6   LVLFLCLTLLCCVTGELSPEGTDDGAPMEKTEQEALYSAIQGFVGDSWNGSDLYPDPCGW 65

Query: 355 TPIQ 366
           TPIQ
Sbjct: 66  TPIQ 69


>ref|NP_564942.1| leucine-rich repeats-ribonuclease inhibitor domain-containing
           protein [Arabidopsis thaliana]
           gi|12324135|gb|AAG52036.1|AC011914_6 unknown protein;
           64153-65607 [Arabidopsis thaliana]
           gi|13605581|gb|AAK32784.1|AF361616_1 At1g68780/F14K14_11
           [Arabidopsis thaliana] gi|53749164|gb|AAU90067.1|
           At1g68780 [Arabidopsis thaliana]
           gi|332196717|gb|AEE34838.1| leucine-rich
           repeats-ribonuclease inhibitor domain-containing protein
           [Arabidopsis thaliana]
          Length = 432

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/60 (60%), Positives = 43/60 (71%)
 Frame = +1

Query: 187 LIFIFCMSVVFCNGEEAEPLGALMEKREQEALYSVIQGFVGKSWNGSDLYPDPWCWTPIQ 366
           L+ ++C+ V +   E  E  G+ MEK EQ ALYS IQGFVG+SWNGS LYPDP  WTPIQ
Sbjct: 15  LLCVWCLVVDWSKAETEESDGSPMEKTEQAALYSTIQGFVGESWNGSYLYPDPCGWTPIQ 74


>ref|XP_002888681.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297334522|gb|EFH64940.1| leucine-rich repeat
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 430

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/60 (60%), Positives = 41/60 (68%)
 Frame = +1

Query: 187 LIFIFCMSVVFCNGEEAEPLGALMEKREQEALYSVIQGFVGKSWNGSDLYPDPWCWTPIQ 366
           L+ ++C+ V     E  E  G  MEK EQ ALYS IQGFVG+SWNGS LYPDP  WTPIQ
Sbjct: 13  LLCVWCLVVDLSKAETEESEGGPMEKTEQAALYSTIQGFVGESWNGSYLYPDPCGWTPIQ 72


>ref|XP_002876925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322763|gb|EFH53184.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 475

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/64 (60%), Positives = 46/64 (71%), Gaps = 4/64 (6%)
 Frame = +1

Query: 187 LIFIFCMSVVFCNGEEAEPL----GALMEKREQEALYSVIQGFVGKSWNGSDLYPDPWCW 354
           ++F+F ++  +C   E+ P     GA MEK EQEALYS IQGFVG SWNGSDLYPDP  W
Sbjct: 7   VLFLF-LTFRWCVTGESSPEVTDDGAPMEKTEQEALYSAIQGFVGDSWNGSDLYPDPCGW 65

Query: 355 TPIQ 366
           TPIQ
Sbjct: 66  TPIQ 69


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