BLASTX nr result
ID: Cnidium21_contig00045666
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00045666 (459 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN74874.1| hypothetical protein VITISV_038921 [Vitis vinifera] 82 6e-14 ref|NP_189195.1| leucine-rich repeat-containing protein [Arabido... 79 3e-13 ref|NP_564942.1| leucine-rich repeats-ribonuclease inhibitor dom... 76 3e-12 ref|XP_002888681.1| leucine-rich repeat family protein [Arabidop... 75 4e-12 ref|XP_002876925.1| predicted protein [Arabidopsis lyrata subsp.... 75 7e-12 >emb|CAN74874.1| hypothetical protein VITISV_038921 [Vitis vinifera] Length = 584 Score = 81.6 bits (200), Expect = 6e-14 Identities = 40/64 (62%), Positives = 48/64 (75%), Gaps = 3/64 (4%) Frame = +1 Query: 184 VLIFIFCMSVVFCNGE---EAEPLGALMEKREQEALYSVIQGFVGKSWNGSDLYPDPWCW 354 +++FI C+ V +C+G+ E P+ A MEK EQEALYS IQGFVG WNGSDLYPDP W Sbjct: 12 LVLFILCLGV-YCDGDGDTEMAPMVAPMEKTEQEALYSTIQGFVGTWWNGSDLYPDPCGW 70 Query: 355 TPIQ 366 TPIQ Sbjct: 71 TPIQ 74 >ref|NP_189195.1| leucine-rich repeat-containing protein [Arabidopsis thaliana] gi|332643528|gb|AEE77049.1| leucine-rich repeat-containing protein [Arabidopsis thaliana] Length = 475 Score = 79.3 bits (194), Expect = 3e-13 Identities = 39/64 (60%), Positives = 44/64 (68%), Gaps = 4/64 (6%) Frame = +1 Query: 187 LIFIFCMSVVFCNGEEAEPLG----ALMEKREQEALYSVIQGFVGKSWNGSDLYPDPWCW 354 L+ C++++ C E P G A MEK EQEALYS IQGFVG SWNGSDLYPDP W Sbjct: 6 LVLFLCLTLLCCVTGELSPEGTDDGAPMEKTEQEALYSAIQGFVGDSWNGSDLYPDPCGW 65 Query: 355 TPIQ 366 TPIQ Sbjct: 66 TPIQ 69 >ref|NP_564942.1| leucine-rich repeats-ribonuclease inhibitor domain-containing protein [Arabidopsis thaliana] gi|12324135|gb|AAG52036.1|AC011914_6 unknown protein; 64153-65607 [Arabidopsis thaliana] gi|13605581|gb|AAK32784.1|AF361616_1 At1g68780/F14K14_11 [Arabidopsis thaliana] gi|53749164|gb|AAU90067.1| At1g68780 [Arabidopsis thaliana] gi|332196717|gb|AEE34838.1| leucine-rich repeats-ribonuclease inhibitor domain-containing protein [Arabidopsis thaliana] Length = 432 Score = 75.9 bits (185), Expect = 3e-12 Identities = 36/60 (60%), Positives = 43/60 (71%) Frame = +1 Query: 187 LIFIFCMSVVFCNGEEAEPLGALMEKREQEALYSVIQGFVGKSWNGSDLYPDPWCWTPIQ 366 L+ ++C+ V + E E G+ MEK EQ ALYS IQGFVG+SWNGS LYPDP WTPIQ Sbjct: 15 LLCVWCLVVDWSKAETEESDGSPMEKTEQAALYSTIQGFVGESWNGSYLYPDPCGWTPIQ 74 >ref|XP_002888681.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp. lyrata] gi|297334522|gb|EFH64940.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp. lyrata] Length = 430 Score = 75.5 bits (184), Expect = 4e-12 Identities = 36/60 (60%), Positives = 41/60 (68%) Frame = +1 Query: 187 LIFIFCMSVVFCNGEEAEPLGALMEKREQEALYSVIQGFVGKSWNGSDLYPDPWCWTPIQ 366 L+ ++C+ V E E G MEK EQ ALYS IQGFVG+SWNGS LYPDP WTPIQ Sbjct: 13 LLCVWCLVVDLSKAETEESEGGPMEKTEQAALYSTIQGFVGESWNGSYLYPDPCGWTPIQ 72 >ref|XP_002876925.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297322763|gb|EFH53184.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 475 Score = 74.7 bits (182), Expect = 7e-12 Identities = 39/64 (60%), Positives = 46/64 (71%), Gaps = 4/64 (6%) Frame = +1 Query: 187 LIFIFCMSVVFCNGEEAEPL----GALMEKREQEALYSVIQGFVGKSWNGSDLYPDPWCW 354 ++F+F ++ +C E+ P GA MEK EQEALYS IQGFVG SWNGSDLYPDP W Sbjct: 7 VLFLF-LTFRWCVTGESSPEVTDDGAPMEKTEQEALYSAIQGFVGDSWNGSDLYPDPCGW 65 Query: 355 TPIQ 366 TPIQ Sbjct: 66 TPIQ 69