BLASTX nr result

ID: Cnidium21_contig00045635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045635
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat...   115   3e-24
ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat...   107   1e-21
ref|XP_004158095.1| PREDICTED: putative pentatricopeptide repeat...    87   2e-15
tpg|DAA46501.1| TPA: hypothetical protein ZEAMMB73_380894 [Zea m...    84   1e-14
ref|XP_003554875.1| PREDICTED: uncharacterized protein LOC100816...    82   4e-14

>ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830 [Vitis vinifera] gi|297735747|emb|CBI18434.3|
           unnamed protein product [Vitis vinifera]
          Length = 659

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/109 (51%), Positives = 74/109 (67%)
 Frame = -1

Query: 328 DVAVNVYHGIIRSQFVVDAHIHTIIVNGLIKSGSISKGIKLLEAAAVEKYTLDVVAYTVA 149
           D AVNVY GI+ +   +DAHIHT+I+ GLIK+G   + ++L + A VE+YTLD V+YTVA
Sbjct: 451 DEAVNVYSGILVNHSDLDAHIHTVIIGGLIKAGKFHRAVRLFKKAMVERYTLDAVSYTVA 510

Query: 148 IRALLRVGSSTSACRLYEQMKRHGVVPNANVCKVLLYSLCKMRDFSMVK 2
           I  LL+ G +  AC LY QMK  G+ PNA+   ++L   CK RD  MVK
Sbjct: 511 IYGLLKGGRTGEACILYNQMKEAGLAPNAHTYNIILSCFCKERDMKMVK 559


>ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like [Cucumis sativus]
          Length = 665

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/107 (47%), Positives = 74/107 (69%)
 Frame = -1

Query: 322 AVNVYHGIIRSQFVVDAHIHTIIVNGLIKSGSISKGIKLLEAAAVEKYTLDVVAYTVAIR 143
           AV +Y+GI+ +   VDAHIHT+I++GLIK+G     I++     +E+ +LDVV+Y+VAIR
Sbjct: 458 AVRLYNGILLNYTGVDAHIHTVIIDGLIKAGKFHSAIRIFRRNLLEENSLDVVSYSVAIR 517

Query: 142 ALLRVGSSTSACRLYEQMKRHGVVPNANVCKVLLYSLCKMRDFSMVK 2
            LL VG +T A  LY  MK  G+ PN +VC V+L + CK + F++VK
Sbjct: 518 GLLLVGRNTEASNLYNYMKEAGINPNGHVCNVMLSTFCKEKKFALVK 564


>ref|XP_004158095.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like [Cucumis sativus]
          Length = 525

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/88 (47%), Positives = 60/88 (68%)
 Frame = -1

Query: 322 AVNVYHGIIRSQFVVDAHIHTIIVNGLIKSGSISKGIKLLEAAAVEKYTLDVVAYTVAIR 143
           AV +Y+GI+ +   VDAHIHT+I++GLIK+G     I++     +E+ +LDVV+Y+VAIR
Sbjct: 366 AVRLYNGILLNYTGVDAHIHTVIIDGLIKAGKFHSAIRIFRRNLLEENSLDVVSYSVAIR 425

Query: 142 ALLRVGSSTSACRLYEQMKRHGVVPNAN 59
            LL VG +T A  LY  MK  G+ PN +
Sbjct: 426 GLLLVGRNTEASNLYNYMKEAGINPNGH 453


>tpg|DAA46501.1| TPA: hypothetical protein ZEAMMB73_380894 [Zea mays]
          Length = 625

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/107 (38%), Positives = 61/107 (57%)
 Frame = -1

Query: 322 AVNVYHGIIRSQFVVDAHIHTIIVNGLIKSGSISKGIKLLEAAAVEKYTLDVVAYTVAIR 143
           A++VYH II S   ++A++H  I+ GL++ G     +++L  A  + Y +D V YTV + 
Sbjct: 428 AIDVYHNIIASAPELNAYVHAAILRGLVRQGQSLAALRILREAVRKNYAVDSVCYTVVLH 487

Query: 142 ALLRVGSSTSACRLYEQMKRHGVVPNANVCKVLLYSLCKMRDFSMVK 2
            L RV     A RL++QMK  G+ PN     V+L  LC+ RD   VK
Sbjct: 488 GLFRVHLVEEAFRLFDQMKNSGLAPNTCTYNVMLCGLCRTRDLHAVK 534


>ref|XP_003554875.1| PREDICTED: uncharacterized protein LOC100816100 [Glycine max]
          Length = 1122

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 40/76 (52%), Positives = 50/76 (65%)
 Frame = -1

Query: 328 DVAVNVYHGIIRSQFVVDAHIHTIIVNGLIKSGSISKGIKLLEAAAVEKYTLDVVAYTVA 149
           D AVNVYHG++ S    DAHIHT+I+ GL+K+G   K + +L  A + KY LD VAYTV 
Sbjct: 437 DKAVNVYHGVVMSYHDTDAHIHTVIIVGLLKTGKFHKAVSVLRFAVMNKYPLDTVAYTVG 496

Query: 148 IRALLRVGSSTSACRL 101
           I ALLR   +  AC L
Sbjct: 497 ICALLRGRRTQEACTL 512


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