BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045630
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi...   322   8e-86
ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|2...   264   2e-68
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,...   263   2e-68
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c...   218   9e-55
ref|XP_002867861.1| predicted protein [Arabidopsis lyrata subsp....   150   2e-34

>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21170-like
            [Vitis vinifera]
          Length = 569

 Score =  322 bits (824), Expect = 8e-86
 Identities = 150/264 (56%), Positives = 205/264 (77%)
 Frame = -3

Query: 794  SMEKNGHIPKLSLSEYDSIIQKLSNAGKTYAAELFFKRAYDEKVELNDAAYECMLRAFSR 615
            SM + G +PKL LSEYDSIIQK+ N GKT+AA++FFKRA +EK+EL++A Y CMLRA ++
Sbjct: 302  SMVEKGLLPKLLLSEYDSIIQKICNLGKTHAAQMFFKRARNEKIELDNATYGCMLRALAK 361

Query: 614  EGRVKAAIAIHDKMLDRGTVENCSCYSLFVNVLCKEDPSEKISKLLKDIIGRGFCPSLSE 435
            +GRVK AI ++  +L+ G      CY  FVNVLC+EDPS+++SKL+ +IIG+GF P  S+
Sbjct: 362  DGRVKEAIGVYLVILESGVTVKDGCYHAFVNVLCEEDPSQEVSKLMGEIIGKGFSPCGSK 421

Query: 434  LSRYIISQCKNRRWREAEDLLDIILEKGFVADPFCSSSLIKHYCSSKRIDSAIGLHNKLE 255
            LS++I S CKN RW EA+DLL++ +EKG + D FC S+L++HYC S++IDS+I LH K++
Sbjct: 422  LSKFITSLCKNGRWTEADDLLNVTIEKGLLPDSFCCSALVEHYCRSRQIDSSIALHEKIK 481

Query: 254  HLNGTLNTNAYNVLVRGLLKERRVEEALKIFDYMRNHNLLNEESFSAMISGLCHENDLKK 75
             + G+L+   YNVL+ GL  E+R+E+A+ +FD MR+ NLL+  SF+ M+SGLC E +L+K
Sbjct: 482  KVKGSLDVATYNVLLNGLFMEKRIEDAVSVFDCMRSQNLLSSTSFTIMVSGLCRERELRK 541

Query: 74   AMKLHDEMLKMGLKPDLKNYKRLI 3
            AMK HDEMLKMGLKPD   YKRLI
Sbjct: 542  AMKFHDEMLKMGLKPDRATYKRLI 565



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 39/186 (20%), Positives = 81/186 (43%), Gaps = 3/186 (1%)
 Frame = -3

Query: 578 KMLDRGTVENCSCYSLFVNVLCKEDPSEKISKLLKDIIGRGFCPSLSELSRYIISQCKNR 399
           ++LD   V N   Y L ++  C+          L ++  R F P     +  +   CK  
Sbjct: 232 RLLDMSIVCNALIYKLVIDCYCERGNFSAAFHYLNEMCNRKFDPGFCAYNSILDGACKYE 291

Query: 398 RWREAEDLLDIILEKGFVADPFCS--SSLIKHYCSSKRIDSAIGLHNKLEHLNGTLNTNA 225
                + ++  ++EKG +     S   S+I+  C+  +  +A     +  +    L+   
Sbjct: 292 NDEVIQIVMGSMVEKGLLPKLLLSEYDSIIQKICNLGKTHAAQMFFKRARNEKIELDNAT 351

Query: 224 YNVLVRGLLKERRVEEALKIFDYMRNHNL-LNEESFSAMISGLCHENDLKKAMKLHDEML 48
           Y  ++R L K+ RV+EA+ ++  +    + + +  + A ++ LC E+  ++  KL  E++
Sbjct: 352 YGCMLRALAKDGRVKEAIGVYLVILESGVTVKDGCYHAFVNVLCEEDPSQEVSKLMGEII 411

Query: 47  KMGLKP 30
             G  P
Sbjct: 412 GKGFSP 417


>ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|222848569|gb|EEE86116.1|
            predicted protein [Populus trichocarpa]
          Length = 564

 Score =  264 bits (674), Expect = 2e-68
 Identities = 128/263 (48%), Positives = 180/263 (68%)
 Frame = -3

Query: 791  MEKNGHIPKLSLSEYDSIIQKLSNAGKTYAAELFFKRAYDEKVELNDAAYECMLRAFSRE 612
            M + G +PK  LS+ DS+IQK S+  K   A +FF+RA DEK+ L DA Y CML+A S+E
Sbjct: 297  MAEKGLLPKCPLSQCDSVIQKFSDLCKMNVATMFFRRACDEKIGLQDATYGCMLKALSKE 356

Query: 611  GRVKAAIAIHDKMLDRGTVENCSCYSLFVNVLCKEDPSEKISKLLKDIIGRGFCPSLSEL 432
             RVK AI ++  + ++G     S Y  F+++L +ED  E+  ++L D++ RGF P    L
Sbjct: 357  ARVKEAIGLYSLISEKGIRVKDSTYHAFLDLLSEEDQYEEGYEILGDMMRRGFRPGTVGL 416

Query: 431  SRYIISQCKNRRWREAEDLLDIILEKGFVADPFCSSSLIKHYCSSKRIDSAIGLHNKLEH 252
            S++I+   + RRWRE EDLLD++LEKG + D  C  SL++HYCS ++ID A+ LHNK+E 
Sbjct: 417  SKFILLLSRKRRWREVEDLLDLVLEKGLLPDSLCCCSLVEHYCSRRQIDKAVALHNKMEK 476

Query: 251  LNGTLNTNAYNVLVRGLLKERRVEEALKIFDYMRNHNLLNEESFSAMISGLCHENDLKKA 72
            L  +L+   YN+L+ GL+K  R+EE +++FDYM+   L+N ESF+  I GLC   +++KA
Sbjct: 477  LQASLDVATYNILLDGLVKNGRIEEVVRVFDYMKGLKLVNSESFTITIRGLCRAKEMRKA 536

Query: 71   MKLHDEMLKMGLKPDLKNYKRLI 3
            MKLHDEML MGLKPD   YKRLI
Sbjct: 537  MKLHDEMLDMGLKPDKAAYKRLI 559


>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 599

 Score =  263 bits (673), Expect = 2e-68
 Identities = 134/257 (52%), Positives = 178/257 (69%)
 Frame = -3

Query: 773  IPKLSLSEYDSIIQKLSNAGKTYAAELFFKRAYDEKVELNDAAYECMLRAFSREGRVKAA 594
            + K   S+YDSIIQKL + GK  AA LFFKRA DE++ L DA Y  MLRAFS EG ++ A
Sbjct: 332  LSKCPSSDYDSIIQKLCDLGKVSAATLFFKRACDERIGLQDATYGRMLRAFSIEGILEEA 391

Query: 593  IAIHDKMLDRGTVENCSCYSLFVNVLCKEDPSEKISKLLKDIIGRGFCPSLSELSRYIIS 414
            I ++  +L+RG     +    FV++L ++D   +  ++++DI+ RGF P  S LS+YI  
Sbjct: 392  IGLYQVILERGLTIKDNASDAFVDLLSEKDQYAEGYEIVRDIMRRGFSPCTSSLSKYITL 451

Query: 413  QCKNRRWREAEDLLDIILEKGFVADPFCSSSLIKHYCSSKRIDSAIGLHNKLEHLNGTLN 234
             CK RRW+EAE+LL ++LEKG + D     SL+KHYCSSK+ D A+ LHN LE L  +L+
Sbjct: 452  LCKKRRWKEAEELLYMVLEKGLLPDTLSFCSLVKHYCSSKQTDKALALHNTLEKLQASLD 511

Query: 233  TNAYNVLVRGLLKERRVEEALKIFDYMRNHNLLNEESFSAMISGLCHENDLKKAMKLHDE 54
              AYN+L+ GL+KE RVEE++K+FDYM+   L N  SF+ +I GLC   +L+KAMKLHDE
Sbjct: 512  ITAYNLLLGGLVKEGRVEESIKVFDYMKGLKLANSASFTVIIRGLCRAKELRKAMKLHDE 571

Query: 53   MLKMGLKPDLKNYKRLI 3
            ML MGLKPD   YKRLI
Sbjct: 572  MLNMGLKPDKPTYKRLI 588


>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
          Length = 585

 Score =  218 bits (556), Expect = 9e-55
 Identities = 112/253 (44%), Positives = 169/253 (66%), Gaps = 5/253 (1%)
 Frame = -3

Query: 746  DSIIQKLSNAGKTYAAELFFKRAYD-EKVELNDAAYECMLRAFSREGRVKAAIAIHDKML 570
            D II++L + GKT+A+E+ F++A + E V L D+ Y CML+A SR+ R K A+ ++  + 
Sbjct: 329  DKIIERLCDMGKTFASEMLFRKACNGETVRLWDSTYGCMLKALSRKKRTKEAVDVYRMIC 388

Query: 569  DRG-TVENCSCYSLFVNVLCKED-PSEKISKLLKDIIGRGFCPSLSELSRYIISQCKNRR 396
             +G TV + SCY  F N LC++D  SE+  +LL D+I RGF P   +LS  + S C+ RR
Sbjct: 389  RKGITVLDESCYIEFANALCRDDNSSEEEEELLVDVIKRGFVPCTHKLSEVLASMCRKRR 448

Query: 395  WREAEDLLDIILEKGFVADPFCSSSLIKHYCSSKRIDSAIGLHNKLEHLNGTLNTNAYNV 216
            W+ AE LLD ++E     D F    L++ YC S +++ A+ LH K++ + G+L+ NAYN 
Sbjct: 449  WKSAEKLLDSVMEMEVYFDSFACGLLMERYCRSGKLEKALVLHEKIKKMKGSLDVNAYNA 508

Query: 215  LVRGLLKERR--VEEALKIFDYMRNHNLLNEESFSAMISGLCHENDLKKAMKLHDEMLKM 42
            ++  L+  ++  VEEA+ +F+YM+  N +N +SF+ MI GLC   ++KKAM+ HDEML++
Sbjct: 509  VLDRLMMRQKEMVEEAVVVFEYMKEINSVNSKSFTIMIQGLCRVKEMKKAMRSHDEMLRL 568

Query: 41   GLKPDLKNYKRLI 3
            GLKPDL  YKRLI
Sbjct: 569  GLKPDLVTYKRLI 581


>ref|XP_002867861.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313697|gb|EFH44120.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 534

 Score =  150 bits (380), Expect = 2e-34
 Identities = 90/253 (35%), Positives = 147/253 (58%), Gaps = 5/253 (1%)
 Frame = -3

Query: 746 DSIIQKLSNAGKTYAAELFFKRAYD-EKVELNDAAYECMLRAFSREGRVKAAIAIHDKML 570
           D +I++L + GKT+A+E+ F++A + E V L ++ Y CML+A SR+ R K A+ ++  + 
Sbjct: 312 DQMIERLCDMGKTFASEMLFRKACNGETVRLRESTYGCMLKALSRKERTKEAVDVYRMIC 371

Query: 569 DRG-TVENCSCYSLFVNVLCKED-PSEKISKLLKDIIGRGFCPSLSELSRYIISQCKNRR 396
            +G  V + SCY+ F N LC++D  SE+  +LL D+I RG      + S  I    +  +
Sbjct: 372 RKGINVLDESCYNEFANALCRDDNSSEEGEELLVDVIKRGKEDGNPQRSFLI----RLWK 427

Query: 395 WREAEDLLDIILEKGFVADPFCSSSLIKHYCSSKRIDSAIGLHNKLEHLNGTLNTNAYNV 216
           WR                              S +++ A+ LH K++ + G+L+ NAYN 
Sbjct: 428 WR------------------------------SGKLEKALELHEKIKKMKGSLDVNAYNA 457

Query: 215 LVRGLLKERR--VEEALKIFDYMRNHNLLNEESFSAMISGLCHENDLKKAMKLHDEMLKM 42
           ++  L+  ++  VEEA+ +F+YM+    +N +SF+ MI GLC   ++KKAM+ HDEML++
Sbjct: 458 VLDRLMMRQKEMVEEAVGVFEYMKEMKSVNSKSFTIMIQGLCRVKEMKKAMRSHDEMLRL 517

Query: 41  GLKPDLKNYKRLI 3
            +KPDL +YKRLI
Sbjct: 518 DMKPDLVSYKRLI 530