BLASTX nr result

ID: Cnidium21_contig00045618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045618
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF02552.1| hypothetical protein [Nicotiana benthamiana]          152   3e-35
ref|XP_002524055.1| Spotted leaf protein, putative [Ricinus comm...   149   2e-34
ref|XP_002275220.2| PREDICTED: E3 ubiquitin-protein ligase PUB24...   144   7e-33
ref|XP_003540288.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   144   7e-33
ref|XP_004166683.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   144   1e-32

>dbj|BAF02552.1| hypothetical protein [Nicotiana benthamiana]
          Length = 425

 Score =  152 bits (384), Expect = 3e-35
 Identities = 79/137 (57%), Positives = 101/137 (73%)
 Frame = -2

Query: 438 GAVFAIIELELDGLVREKRTSELSMQVLFNLCRSADGRAELLSHAAGIAVVTKRIMKVSP 259
           GA+F +IELEL     EKR SEL   +L NLC  ADGRAELL HAAGIAVVTKR +++S 
Sbjct: 283 GAIFELIELELSN--PEKRVSELVFCLLANLCVLADGRAELLKHAAGIAVVTKRTLRISS 340

Query: 258 TLDEAAVSIISLISKFSGTDLVVNEMLRVGTVSRLCMVLQSNCDSGLKEKAMEILRRHTH 79
             D++A+ I+ LISKFS T+ V+ EMLRVG VS+LCM +Q++C+  LK+KA EILR H+H
Sbjct: 341 ATDDSALQILGLISKFSATNEVLLEMLRVGGVSKLCMAIQADCEPHLKKKAREILRAHSH 400

Query: 78  VWKDSPCADLLLLTMYT 28
           VW +SPC  L  + + T
Sbjct: 401 VWSNSPCISLYTVYLLT 417


>ref|XP_002524055.1| Spotted leaf protein, putative [Ricinus communis]
           gi|223536623|gb|EEF38265.1| Spotted leaf protein,
           putative [Ricinus communis]
          Length = 403

 Score =  149 bits (377), Expect = 2e-34
 Identities = 79/134 (58%), Positives = 98/134 (73%)
 Frame = -2

Query: 438 GAVFAIIELELDGLVREKRTSELSMQVLFNLCRSADGRAELLSHAAGIAVVTKRIMKVSP 259
           GAVF +IELE      EK+T+EL + +LF+LC  ADGRA+ LSH  GIAVV KRI+KVSP
Sbjct: 271 GAVFELIELEWR--YPEKKTTELILGILFHLCSCADGRAKFLSHRGGIAVVAKRILKVSP 328

Query: 258 TLDEAAVSIISLISKFSGTDLVVNEMLRVGTVSRLCMVLQSNCDSGLKEKAMEILRRHTH 79
             D+ AV I+SLI KFSGT +V+ EML V  VS+LCM+LQ++C   LK+KA EILR H+ 
Sbjct: 329 AADDRAVLILSLICKFSGTSMVLQEMLNVKAVSKLCMMLQADCAVYLKDKAREILRLHSD 388

Query: 78  VWKDSPCADLLLLT 37
            WK+SPC D   LT
Sbjct: 389 EWKNSPCIDASFLT 402


>ref|XP_002275220.2| PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Vitis vinifera]
          Length = 466

 Score =  144 bits (363), Expect = 7e-33
 Identities = 75/134 (55%), Positives = 102/134 (76%)
 Frame = -2

Query: 438 GAVFAIIELELDGLVREKRTSELSMQVLFNLCRSADGRAELLSHAAGIAVVTKRIMKVSP 259
           GAVF +IE+EL+    EK+ +E+   +L +LC  ADGRA+ L+HA  +A+++KRI++VS 
Sbjct: 276 GAVFQLIEMELEN--PEKKITEIIFCLLGHLCSCADGRAQFLAHAGSMAMLSKRILRVSN 333

Query: 258 TLDEAAVSIISLISKFSGTDLVVNEMLRVGTVSRLCMVLQSNCDSGLKEKAMEILRRHTH 79
           T D+ A+ II+LISKFSGT+ V+ EMLRVG VS+LCMVLQ++C   LKEKA EILR H+ 
Sbjct: 334 TTDDRALHIIALISKFSGTNEVLMEMLRVGAVSKLCMVLQADCAKYLKEKAREILRLHSK 393

Query: 78  VWKDSPCADLLLLT 37
           VW +SPC  + LLT
Sbjct: 394 VWNNSPCIAVYLLT 407


>ref|XP_003540288.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Glycine max]
          Length = 427

 Score =  144 bits (363), Expect = 7e-33
 Identities = 76/136 (55%), Positives = 98/136 (72%)
 Frame = -2

Query: 438 GAVFAIIELELDGLVREKRTSELSMQVLFNLCRSADGRAELLSHAAGIAVVTKRIMKVSP 259
           GAV  +IEL L+    EK  +EL   +L NLC  ADGR + L HAAGIAVV+KRI++VSP
Sbjct: 292 GAVIELIELALEK--PEKNMTELVFILLANLCSCADGREQFLQHAAGIAVVSKRILRVSP 349

Query: 258 TLDEAAVSIISLISKFSGTDLVVNEMLRVGTVSRLCMVLQSNCDSGLKEKAMEILRRHTH 79
           T ++ A+ I SL+SKFS ++ VV EMLRVG VS+LCMVLQ++C S LKEKA  +LR H+ 
Sbjct: 350 TTNDRALHIFSLVSKFSASNEVVQEMLRVGAVSKLCMVLQADCASYLKEKARGVLRLHSK 409

Query: 78  VWKDSPCADLLLLTMY 31
            W +SPC  + LLT +
Sbjct: 410 TWNNSPCIQVYLLTRF 425


>ref|XP_004166683.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus]
          Length = 393

 Score =  144 bits (362), Expect = 1e-32
 Identities = 75/134 (55%), Positives = 100/134 (74%)
 Frame = -2

Query: 438 GAVFAIIELELDGLVREKRTSELSMQVLFNLCRSADGRAELLSHAAGIAVVTKRIMKVSP 259
           GAVF +I LEL+    EK+T+EL   +L +LC +ADGRAEL+ HA GIAVV+KRI++VS 
Sbjct: 258 GAVFDLIALELEK--PEKKTTELIFNLLAHLCSTADGRAELIRHAGGIAVVSKRILRVSI 315

Query: 258 TLDEAAVSIISLISKFSGTDLVVNEMLRVGTVSRLCMVLQSNCDSGLKEKAMEILRRHTH 79
              + A+ I+SLISK S    V+ EMLRVG VS+LCM++QSNC+  LKEKA EILR H++
Sbjct: 316 ATTDRAIQILSLISKHSARKDVLLEMLRVGAVSKLCMMMQSNCEGYLKEKAREILRMHSN 375

Query: 78  VWKDSPCADLLLLT 37
           VW +SPC  + ++T
Sbjct: 376 VWSNSPCIGVYVMT 389


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