BLASTX nr result

ID: Cnidium21_contig00045617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045617
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242472.1| uncharacterized protein LOC100800402 [Glycin...    59   2e-15
ref|XP_002876806.1| hypothetical protein ARALYDRAFT_322561 [Arab...    56   4e-15
ref|XP_002270048.1| PREDICTED: F-box protein PP2-B1 [Vitis vinif...    55   1e-14
emb|CBI38318.3| unnamed protein product [Vitis vinifera]               55   1e-14
ref|XP_003638370.1| F-box protein PP2-B1 [Medicago truncatula] g...    54   2e-14

>ref|NP_001242472.1| uncharacterized protein LOC100800402 [Glycine max]
           gi|255632332|gb|ACU16524.1| unknown [Glycine max]
          Length = 254

 Score = 58.5 bits (140), Expect(2) = 2e-15
 Identities = 27/52 (51%), Positives = 35/52 (67%)
 Frame = -3

Query: 394 QGFRQKLTQEILSRTSPADVARLSVVSKSFQSSANSDVVWDSFIPPDHRKLV 239
           QG  +     ILSRT+PADV R SVVSK F+S+A SD VW  F+P D+  ++
Sbjct: 4   QGLPEGCIASILSRTTPADVCRFSVVSKIFRSTAESDAVWKRFLPSDYHSII 55



 Score = 48.1 bits (113), Expect(2) = 2e-15
 Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
 Frame = -1

Query: 222 SFWLDKWSGKICLDINDEKLTITQLDTD-YW---MKSLYGFPVLGH---VLWLEVHGKIP 64
           SF L+K SGK C  +    L+I   DT+ YW     +   FP +     V WLE+ G + 
Sbjct: 87  SFQLEKKSGKKCYMLAARALSIIWGDTEQYWNWTTDTNSRFPEVAELRDVCWLEIRGVLN 146

Query: 63  TSRLSPDTAYEAYLVFTLSD 4
           T  LSP+T Y AYLVF + D
Sbjct: 147 TLVLSPNTQYAAYLVFKMID 166


>ref|XP_002876806.1| hypothetical protein ARALYDRAFT_322561 [Arabidopsis lyrata subsp.
           lyrata] gi|297322644|gb|EFH53065.1| hypothetical protein
           ARALYDRAFT_322561 [Arabidopsis lyrata subsp. lyrata]
          Length = 317

 Score = 55.8 bits (133), Expect(2) = 4e-15
 Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
 Frame = -1

Query: 261 HLIIENLFLIAPASFWLDKWSGKICLDINDEKLTITQLDT-DYWM------KSLYGFPVL 103
           H++IE+       SFWL+K SGK C+ ++ ++L IT   + +YW               L
Sbjct: 130 HVLIED----GKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWISVPESRFEKVAEL 185

Query: 102 GHVLWLEVHGKIPTSRLSPDTAYEAYLVFTLSD 4
            +V W E+ GK  T  LSP T Y AY+VF  +D
Sbjct: 186 LNVCWFEIRGKTSTRLLSPGTRYSAYIVFKTND 218



 Score = 50.1 bits (118), Expect(2) = 4e-15
 Identities = 22/42 (52%), Positives = 30/42 (71%)
 Frame = -3

Query: 364 ILSRTSPADVARLSVVSKSFQSSANSDVVWDSFIPPDHRKLV 239
           I+S TSP +    + VSK+F+S+ NSD VWD F+PPD+  LV
Sbjct: 69  IISFTSPREACVAASVSKTFESAVNSDSVWDKFLPPDYSSLV 110


>ref|XP_002270048.1| PREDICTED: F-box protein PP2-B1 [Vitis vinifera]
          Length = 349

 Score = 55.1 bits (131), Expect(2) = 1e-14
 Identities = 35/76 (46%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
 Frame = -1

Query: 222 SFWLDKWSGKICLDINDEKLTITQLDTD-YWMKSLYG---FPVLGH---VLWLEVHGKIP 64
           SFWL+K SGK C  +   +LTI   DT  YW  +      FP + +   V W E+ GKI 
Sbjct: 107 SFWLEKRSGKKCYMLASRELTIIWGDTPGYWEWTSLPESRFPEVAYLQAVCWFEIRGKIN 166

Query: 63  TSRLSPDTAYEAYLVF 16
           T  LSP T Y AYLVF
Sbjct: 167 TCMLSPRTNYAAYLVF 182



 Score = 49.3 bits (116), Expect(2) = 1e-14
 Identities = 19/43 (44%), Positives = 32/43 (74%)
 Frame = -3

Query: 367 EILSRTSPADVARLSVVSKSFQSSANSDVVWDSFIPPDHRKLV 239
           ++L+ TSP DV R+S V+  F S+A SD +W+ F+P D+R+++
Sbjct: 30  DVLALTSPRDVCRMSAVASVFLSAAESDALWERFLPADYREII 72


>emb|CBI38318.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score = 55.1 bits (131), Expect(2) = 1e-14
 Identities = 35/76 (46%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
 Frame = -1

Query: 222 SFWLDKWSGKICLDINDEKLTITQLDTD-YWMKSLYG---FPVLGH---VLWLEVHGKIP 64
           SFWL+K SGK C  +   +LTI   DT  YW  +      FP + +   V W E+ GKI 
Sbjct: 107 SFWLEKRSGKKCYMLASRELTIIWGDTPGYWEWTSLPESRFPEVAYLQAVCWFEIRGKIN 166

Query: 63  TSRLSPDTAYEAYLVF 16
           T  LSP T Y AYLVF
Sbjct: 167 TCMLSPRTNYAAYLVF 182



 Score = 49.3 bits (116), Expect(2) = 1e-14
 Identities = 19/43 (44%), Positives = 32/43 (74%)
 Frame = -3

Query: 367 EILSRTSPADVARLSVVSKSFQSSANSDVVWDSFIPPDHRKLV 239
           ++L+ TSP DV R+S V+  F S+A SD +W+ F+P D+R+++
Sbjct: 30  DVLALTSPRDVCRMSAVASVFLSAAESDALWERFLPADYREII 72


>ref|XP_003638370.1| F-box protein PP2-B1 [Medicago truncatula]
           gi|355504305|gb|AES85508.1| F-box protein PP2-B1
           [Medicago truncatula]
          Length = 275

 Score = 53.9 bits (128), Expect(2) = 2e-14
 Identities = 24/42 (57%), Positives = 32/42 (76%)
 Frame = -3

Query: 364 ILSRTSPADVARLSVVSKSFQSSANSDVVWDSFIPPDHRKLV 239
           ILSRT+P D  RLSVVSK+F S+A+SD VW+ F+P D   ++
Sbjct: 15  ILSRTTPVDAGRLSVVSKTFLSAADSDAVWNHFLPSDVNSII 56



 Score = 49.7 bits (117), Expect(2) = 2e-14
 Identities = 35/83 (42%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
 Frame = -1

Query: 231 APASFWLDKWSGKICLDINDEKLTITQLDTD-YWMKSLYG---FPVLGH---VLWLEVHG 73
           A  SF LD+ SGK C  +    L I   D D YW+ +      FP + +   V WLE+ G
Sbjct: 85  AKKSFQLDRKSGKKCYMLAARSLHIIWGDDDRYWIWTAMPDSRFPEVANLRLVWWLEIRG 144

Query: 72  KIPTSRLSPDTAYEAYLVFTLSD 4
            I    LSP+T Y AYLVF L D
Sbjct: 145 MINNLALSPNTQYAAYLVFKLID 167


Top