BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045562
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   139   3e-31
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   139   3e-31
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   131   7e-29
ref|XP_003516687.1| PREDICTED: DNA-directed RNA polymerase D sub...   130   1e-28
ref|XP_003538711.1| PREDICTED: DNA-directed RNA polymerase D sub...   129   2e-28

>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
           subunit 1-like [Vitis vinifera]
          Length = 1560

 Score =  139 bits (349), Expect = 3e-31
 Identities = 79/135 (58%), Positives = 93/135 (68%)
 Frame = -1

Query: 405 QLINIQNGQNLLSLTQDSLTAAQLVIEDGVLLNRSQMQQLQMFCTQSRPLQAPAIIXXXX 226
           QLIN Q+G+NLLSL+QDSL+AA LV+EDGVLLN  QMQQL+MFC     LQ+PAII    
Sbjct: 511 QLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEMFCPYQ--LQSPAIIKAPL 568

Query: 225 XXXXXXXXXSDTFLWTGKQLFSLLLPQDFYYNCPSSAVQIMKGELITSQSTSSWLRDTKG 46
                     DT +WTGKQLFS+LLP  F Y  P + V+I  GELI+S   S+WLRD  G
Sbjct: 569 L---------DTQVWTGKQLFSMLLPPGFNYVFPLNGVRISDGELISSSDGSAWLRDIDG 619

Query: 45  NLFYSLVSHCQGEFL 1
           NLF SLV  CQG+ L
Sbjct: 620 NLFSSLVKDCQGKAL 634


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  139 bits (349), Expect = 3e-31
 Identities = 79/135 (58%), Positives = 93/135 (68%)
 Frame = -1

Query: 405 QLINIQNGQNLLSLTQDSLTAAQLVIEDGVLLNRSQMQQLQMFCTQSRPLQAPAIIXXXX 226
           QLIN Q+G+NLLSL+QDSL+AA LV+EDGVLLN  QMQQL+MFC     LQ+PAII    
Sbjct: 481 QLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEMFCPYQ--LQSPAIIKAPL 538

Query: 225 XXXXXXXXXSDTFLWTGKQLFSLLLPQDFYYNCPSSAVQIMKGELITSQSTSSWLRDTKG 46
                     DT +WTGKQLFS+LLP  F Y  P + V+I  GELI+S   S+WLRD  G
Sbjct: 539 L---------DTQVWTGKQLFSMLLPPGFNYVFPLNGVRISDGELISSSDGSAWLRDIDG 589

Query: 45  NLFYSLVSHCQGEFL 1
           NLF SLV  CQG+ L
Sbjct: 590 NLFSSLVKDCQGKAL 604


>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 1475

 Score =  131 bits (329), Expect = 7e-29
 Identities = 74/135 (54%), Positives = 89/135 (65%)
 Frame = -1

Query: 405 QLINIQNGQNLLSLTQDSLTAAQLVIEDGVLLNRSQMQQLQMFCTQSRPLQAPAIIXXXX 226
           QLIN+QNG+NLLS +QDSL AA LV+EDGVLL+  QMQQLQMFC     L +PA+     
Sbjct: 484 QLINVQNGRNLLSFSQDSLVAAHLVMEDGVLLSLQQMQQLQMFCPHQ--LFSPAV----- 536

Query: 225 XXXXXXXXXSDTFLWTGKQLFSLLLPQDFYYNCPSSAVQIMKGELITSQSTSSWLRDTKG 46
                     +   WTGKQL S+LLP+ F + CPSS V I  GELI+S+  S WLRDT G
Sbjct: 537 ----RKAPSLNGCAWTGKQLISMLLPRGFDHECPSSDVYIRDGELISSEG-SFWLRDTDG 591

Query: 45  NLFYSLVSHCQGEFL 1
           NLF SL+  CQ + L
Sbjct: 592 NLFQSLIKQCQDQVL 606


>ref|XP_003516687.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Glycine
           max]
          Length = 1622

 Score =  130 bits (327), Expect = 1e-28
 Identities = 71/135 (52%), Positives = 90/135 (66%)
 Frame = -1

Query: 405 QLINIQNGQNLLSLTQDSLTAAQLVIEDGVLLNRSQMQQLQMFCTQSRPLQAPAIIXXXX 226
           QLIN Q+G+NLLSL+QDSLTAA L++EDGVLLN  QMQQLQM    ++ L  PA++    
Sbjct: 474 QLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSISNKRLIPPAVVKAPS 533

Query: 225 XXXXXXXXXSDTFLWTGKQLFSLLLPQDFYYNCPSSAVQIMKGELITSQSTSSWLRDTKG 46
                     ++ LW GKQLFS+LLP DF Y+ PS  V +  GEL++S   S WLRD+  
Sbjct: 534 S---------NSSLWNGKQLFSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLRDSDY 584

Query: 45  NLFYSLVSHCQGEFL 1
           N+F SLV H QG+ L
Sbjct: 585 NVFQSLVEHYQGKTL 599


>ref|XP_003538711.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Glycine
           max]
          Length = 1461

 Score =  129 bits (325), Expect = 2e-28
 Identities = 70/135 (51%), Positives = 90/135 (66%)
 Frame = -1

Query: 405 QLINIQNGQNLLSLTQDSLTAAQLVIEDGVLLNRSQMQQLQMFCTQSRPLQAPAIIXXXX 226
           QLIN Q+G+NLLSL+QDSLTAA L++EDGVLLN  QMQQLQM     + L  PA++    
Sbjct: 481 QLINGQSGRNLLSLSQDSLTAAYLLMEDGVLLNVYQMQQLQMLSISDKRLIPPAVVKAPS 540

Query: 225 XXXXXXXXXSDTFLWTGKQLFSLLLPQDFYYNCPSSAVQIMKGELITSQSTSSWLRDTKG 46
                     ++ LW+GKQ+FS+LLP DF Y+ PS  V +  GEL++S   S WLRD+  
Sbjct: 541 S---------NSSLWSGKQIFSMLLPYDFDYSFPSDGVVVSDGELVSSSEASGWLRDSDY 591

Query: 45  NLFYSLVSHCQGEFL 1
           N+F SLV H QG+ L
Sbjct: 592 NVFQSLVEHYQGKTL 606