BLASTX nr result
ID: Cnidium21_contig00045561
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00045561
(620 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001057345.1| Os06g0266100 [Oryza sativa Japonica Group] g... 187 1e-45
emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group] g... 187 2e-45
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69... 186 2e-45
gb|ABF98227.1| retrotransposon protein, putative, unclassified [... 186 2e-45
gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group] 186 2e-45
>ref|NP_001057345.1| Os06g0266100 [Oryza sativa Japonica Group]
gi|113595385|dbj|BAF19259.1| Os06g0266100, partial
[Oryza sativa Japonica Group]
Length = 399
Score = 187 bits (475), Expect = 1e-45
Identities = 95/205 (46%), Positives = 135/205 (65%), Gaps = 1/205 (0%)
Frame = +2
Query: 8 AEWWYNTTFHTTLQTSPFEIVYGIKPRYLPGQDRVHTNISSLEIMLATRQQQWATLKEIL 187
AE+WYNT FH+ L TSPFE++YG PRY G I L++ L R+ + +++ L
Sbjct: 123 AEFWYNTAFHSALNTSPFEVLYGHPPRYF-GIHSEDCAIPELQVWLKERRLMHSLIQQHL 181
Query: 188 ALAQERMKSYADQNISEREFAVGDWVYLKLQPYRQVTVAIRKNLKLSAKFFGPYKIEERV 367
AQ+ MK+ AD+ S R F +GDWVY+KLQPY Q +VA R N KL+ ++FGP+++ ++
Sbjct: 182 NRAQQHMKNMADKKRSFRSFELGDWVYIKLQPYVQSSVAARANHKLAFRYFGPFQVIQKF 241
Query: 368 GKVAYRLELPTTSRVHPVFHVSQLKKAVG-HAKVHRQLPQVNDQGTFDLRPLRKLDSRSL 544
G VAY+L+LPTTS +HPVFHVSQLK A G +H LP +D + P+ LD+R +
Sbjct: 242 GSVAYKLQLPTTSSIHPVFHVSQLKAAKGFQGALHSTLPSSDDAFQY---PIMLLDNRLI 298
Query: 545 VKDHKVLYQVLVQWKGCSVDEATWE 619
K + + QVL+QW +V++ATWE
Sbjct: 299 KKGNTTVSQVLIQWSDTAVEDATWE 323
>emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group]
gi|38347666|emb|CAE05600.2| OSJNBa0054D14.1 [Oryza sativa
Japonica Group]
Length = 1629
Score = 187 bits (474), Expect = 2e-45
Identities = 96/205 (46%), Positives = 133/205 (64%), Gaps = 1/205 (0%)
Frame = +2
Query: 8 AEWWYNTTFHTTLQTSPFEIVYGIKPRYLPGQDRVHTNISSLEIMLATRQQQWATLKEIL 187
AE+WYNT+FH+ L T+PFE++YG KPRY L L R++ A +++ L
Sbjct: 1363 AEYWYNTSFHSALGTTPFEVLYGHKPRYFGLSASAACRSDDLVEWLHEREKMQALIRDHL 1422
Query: 188 ALAQERMKSYADQNISEREFAVGDWVYLKLQPYRQVTVAIRKNLKLSAKFFGPYKIEERV 367
AQ RMK ADQ+ SER FAVGDWVYLKLQP+ Q +V R N KLS +F+GP+++ ++V
Sbjct: 1423 LRAQTRMKQQADQHRSERSFAVGDWVYLKLQPFVQQSVVTRANRKLSFRFYGPFQVLDKV 1482
Query: 368 GKVAYRLELPTTSRVHPVFHVSQLKKAVGHA-KVHRQLPQVNDQGTFDLRPLRKLDSRSL 544
G VAYRL+LP++S +HPV HVSQLKKA+ +VH LP ++ + P + LD R +
Sbjct: 1483 GTVAYRLDLPSSSLIHPVVHVSQLKKALAPTEQVHSPLPVLDPTNATHVCPAQILDRRFI 1542
Query: 545 VKDHKVLYQVLVQWKGCSVDEATWE 619
K K++ Q+ V+W G + TWE
Sbjct: 1543 RKGSKLVEQIQVRWTGDAPAATTWE 1567
>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 186 bits (473), Expect = 2e-45
Identities = 100/208 (48%), Positives = 137/208 (65%), Gaps = 4/208 (1%)
Frame = +2
Query: 8 AEWWYNTTFHTTLQTSPFEIVYGIKPR----YLPGQDRVHTNISSLEIMLATRQQQWATL 175
AE+WYNT +H++ + +PFEIVYG P YLPG+ +V SL+ R+ L
Sbjct: 1283 AEYWYNTNYHSSSRMTPFEIVYGQVPPVHLPYLPGESKVAVVARSLQ----EREDMLLFL 1338
Query: 176 KEILALAQERMKSYADQNISEREFAVGDWVYLKLQPYRQVTVAIRKNLKLSAKFFGPYKI 355
K L AQ RMK +ADQ+ +EREF +GD+VY+KLQPYRQ +V +R N KLS K+FGPYKI
Sbjct: 1339 KFHLMRAQHRMKQFADQHRTEREFEIGDYVYVKLQPYRQQSVVMRANQKLSPKYFGPYKI 1398
Query: 356 EERVGKVAYRLELPTTSRVHPVFHVSQLKKAVGHAKVHRQLPQVNDQGTFDLRPLRKLDS 535
+R G+VAY+L LP+ S+VHPVFHVSQLK VG+ LP V Q F+ P + ++
Sbjct: 1399 IDRCGEVAYKLALPSYSQVHPVFHVSQLKVLVGNVSTTVHLPSVM-QDVFEKVPEKVVER 1457
Query: 536 RSLVKDHKVLYQVLVQWKGCSVDEATWE 619
+ + + K + +VLV+W ++EATWE
Sbjct: 1458 KMVNRQGKAVTKVLVKWSNEPLEEATWE 1485
>gb|ABF98227.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1160
Score = 186 bits (473), Expect = 2e-45
Identities = 93/208 (44%), Positives = 135/208 (64%), Gaps = 2/208 (0%)
Frame = +2
Query: 2 PAAEWWYNTTFHTTLQTSPFEIVYGIKPRYLPGQDRVHTNISS-LEIMLATRQQQWATLK 178
P AEWWYNT++HT+LQ + +E +YG+ P ++ G+ + N+S + R+ A LK
Sbjct: 940 PTAEWWYNTSYHTSLQVTSYEAMYGVTPPHI-GERAIPGNVSEEARATVQQREDMLARLK 998
Query: 179 EILALAQERMKSYADQNISEREFAVGDWVYLKLQPYRQVTVAIRKNLKLSAKFFGPYKIE 358
E LA AQ R+K D+ SER+F +GD VYLK+QPYRQ +R +LKL AKF+GP+++
Sbjct: 999 ENLAKAQTRIKKLVDRLRSERQFELGDMVYLKMQPYRQNAFGLRGSLKLRAKFYGPFRVL 1058
Query: 359 ERVGKVAYRLELPTTSRVHPVFHVSQLKKAVGHAKVH-RQLPQVNDQGTFDLRPLRKLDS 535
E++GKVAY+L+LP + +HPVFHVSQLKK VG + LP V GT PL L
Sbjct: 1059 EKIGKVAYKLQLPEEANIHPVFHVSQLKKHVGRQAIPLPNLPLVGADGTVKTEPLAVLAR 1118
Query: 536 RSLVKDHKVLYQVLVQWKGCSVDEATWE 619
R + + ++ + Q L+ W+ + ++ATWE
Sbjct: 1119 RVIPRQNEPVVQWLIHWENLTPEDATWE 1146
>gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1246
Score = 186 bits (473), Expect = 2e-45
Identities = 93/208 (44%), Positives = 135/208 (64%), Gaps = 2/208 (0%)
Frame = +2
Query: 2 PAAEWWYNTTFHTTLQTSPFEIVYGIKPRYLPGQDRVHTNISS-LEIMLATRQQQWATLK 178
P AEWWYNT++HT+LQ + +E +YG+ P ++ G+ + N+S + R+ A LK
Sbjct: 1026 PTAEWWYNTSYHTSLQVTSYEAMYGVTPPHI-GERAIPGNVSEEARATVQQREDMLARLK 1084
Query: 179 EILALAQERMKSYADQNISEREFAVGDWVYLKLQPYRQVTVAIRKNLKLSAKFFGPYKIE 358
E LA AQ R+K D+ SER+F +GD VYLK+QPYRQ +R +LKL AKF+GP+++
Sbjct: 1085 ENLAKAQTRIKKLVDRLRSERQFELGDMVYLKMQPYRQNAFGLRGSLKLRAKFYGPFRVL 1144
Query: 359 ERVGKVAYRLELPTTSRVHPVFHVSQLKKAVGHAKVH-RQLPQVNDQGTFDLRPLRKLDS 535
E++GKVAY+L+LP + +HPVFHVSQLKK VG + LP V GT PL L
Sbjct: 1145 EKIGKVAYKLQLPEEANIHPVFHVSQLKKHVGRQAIPLPNLPLVGADGTVKTEPLAVLAR 1204
Query: 536 RSLVKDHKVLYQVLVQWKGCSVDEATWE 619
R + + ++ + Q L+ W+ + ++ATWE
Sbjct: 1205 RVIPRQNEPVVQWLIHWENLTPEDATWE 1232