BLASTX nr result

ID: Cnidium21_contig00045500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045500
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    83   7e-27
ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    83   9e-27
ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    83   9e-27
ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    83   9e-27
gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza...    78   2e-24

>ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355513988|gb|AES95611.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1427

 Score = 83.2 bits (204), Expect(2) = 7e-27
 Identities = 35/70 (50%), Positives = 48/70 (68%)
 Frame = -2

Query: 378 WFRTHQTTLRNDLYSHICDYLRKGDGDAANVGKSFILPAGFVGSKRYMQQNFQDALAVCR 199
           W R +QT LR DLY ++CD + +GD  AA  GK  +LP+ F G  RYM QN+QDA+A+CR
Sbjct: 333 WVRQNQTVLRTDLYRNVCDAVVRGDTIAAATGKRIVLPSSFTGGSRYMVQNYQDAMAICR 392

Query: 198 HVGHPEFFFS 169
             G+P+ F +
Sbjct: 393 TFGNPDIFMT 402



 Score = 62.4 bits (150), Expect(2) = 7e-27
 Identities = 27/57 (47%), Positives = 38/57 (66%)
 Frame = -1

Query: 175 FFTMTTNPLWDEIQKMMAFLPGCKTENSPDVVTRVFRLKLEQLITDIKKKSYFGKCV 5
           F T T NP W EIQ M+  +PG   ++ PD+ TRVF++KL+QL+  I +  YFGK +
Sbjct: 400 FMTFTANPKWPEIQYMLQKIPGQSVDDRPDIKTRVFKMKLDQLMKHIVEGQYFGKII 456


>ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355510179|gb|AES91321.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score = 82.8 bits (203), Expect(2) = 9e-27
 Identities = 35/70 (50%), Positives = 48/70 (68%)
 Frame = -2

Query: 378 WFRTHQTTLRNDLYSHICDYLRKGDGDAANVGKSFILPAGFVGSKRYMQQNFQDALAVCR 199
           W R +QT LR DLY ++CD + +GD  AA  GK  +LP+ F G  RYM QN+QDA+A+CR
Sbjct: 333 WVRQNQTVLRTDLYRNVCDAVVRGDTIAAATGKRIVLPSSFTGGPRYMVQNYQDAMAICR 392

Query: 198 HVGHPEFFFS 169
             G+P+ F +
Sbjct: 393 TFGNPDIFMT 402



 Score = 62.4 bits (150), Expect(2) = 9e-27
 Identities = 27/57 (47%), Positives = 38/57 (66%)
 Frame = -1

Query: 175 FFTMTTNPLWDEIQKMMAFLPGCKTENSPDVVTRVFRLKLEQLITDIKKKSYFGKCV 5
           F T T NP W EIQ M+  +PG   ++ PD+ TRVF++KL+QL+  I +  YFGK +
Sbjct: 400 FMTFTANPKWPEIQYMLQKIPGQSVDDRPDIKTRVFKMKLDQLMKHIVEGQYFGKII 456


>ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355507968|gb|AES89110.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score = 82.8 bits (203), Expect(2) = 9e-27
 Identities = 35/70 (50%), Positives = 48/70 (68%)
 Frame = -2

Query: 378 WFRTHQTTLRNDLYSHICDYLRKGDGDAANVGKSFILPAGFVGSKRYMQQNFQDALAVCR 199
           W R +QT LR DLY ++CD + +GD  AA  GK  +LP+ F G  RYM QN+QDA+A+CR
Sbjct: 333 WVRQNQTVLRTDLYRNVCDAVVRGDTIAAATGKRIVLPSSFTGGPRYMVQNYQDAMAICR 392

Query: 198 HVGHPEFFFS 169
             G+P+ F +
Sbjct: 393 TFGNPDIFMT 402



 Score = 62.4 bits (150), Expect(2) = 9e-27
 Identities = 27/57 (47%), Positives = 38/57 (66%)
 Frame = -1

Query: 175 FFTMTTNPLWDEIQKMMAFLPGCKTENSPDVVTRVFRLKLEQLITDIKKKSYFGKCV 5
           F T T NP W EIQ M+  +PG   ++ PD+ TRVF++KL+QL+  I +  YFGK +
Sbjct: 400 FMTFTANPKWPEIQYMLQKIPGQSVDDRPDIKTRVFKMKLDQLMKHIVEGQYFGKII 456


>ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355510129|gb|AES91271.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1531

 Score = 82.8 bits (203), Expect(2) = 9e-27
 Identities = 35/70 (50%), Positives = 48/70 (68%)
 Frame = -2

Query: 378 WFRTHQTTLRNDLYSHICDYLRKGDGDAANVGKSFILPAGFVGSKRYMQQNFQDALAVCR 199
           W R +QT LR DLY ++CD + +GD  AA  GK  +LP+ F G  RYM QN+QDA+A+CR
Sbjct: 306 WVRQNQTVLRTDLYRNVCDAVVRGDTIAAATGKRIVLPSSFTGGPRYMVQNYQDAMAICR 365

Query: 198 HVGHPEFFFS 169
             G+P+ F +
Sbjct: 366 TFGNPDIFMT 375



 Score = 62.4 bits (150), Expect(2) = 9e-27
 Identities = 27/57 (47%), Positives = 38/57 (66%)
 Frame = -1

Query: 175 FFTMTTNPLWDEIQKMMAFLPGCKTENSPDVVTRVFRLKLEQLITDIKKKSYFGKCV 5
           F T T NP W EIQ M+  +PG   ++ PD+ TRVF++KL+QL+  I +  YFGK +
Sbjct: 373 FMTFTANPKWPEIQYMLQKIPGQSVDDRPDIKTRVFKMKLDQLMKHIVEGQYFGKII 429


>gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza sativa Japonica
           Group]
          Length = 1682

 Score = 78.2 bits (191), Expect(2) = 2e-24
 Identities = 33/68 (48%), Positives = 45/68 (66%)
 Frame = -2

Query: 378 WFRTHQTTLRNDLYSHICDYLRKGDGDAANVGKSFILPAGFVGSKRYMQQNFQDALAVCR 199
           W R HQ  LR +LY+ + D + +GD  A  VGK  +LP+ F GS RY  QN+QDA+A+CR
Sbjct: 611 WIRKHQGNLRTELYAGLQDAIERGDTRAEQVGKRILLPSSFTGSPRYKAQNYQDAMAICR 670

Query: 198 HVGHPEFF 175
             G+P+ F
Sbjct: 671 WAGYPDLF 678



 Score = 59.3 bits (142), Expect(2) = 2e-24
 Identities = 28/55 (50%), Positives = 35/55 (63%)
 Frame = -1

Query: 175 FFTMTTNPLWDEIQKMMAFLPGCKTENSPDVVTRVFRLKLEQLITDIKKKSYFGK 11
           F T T N  W EIQ M+  +   K  + PD+V RVF +KL +L+TDIK K YFGK
Sbjct: 678 FVTFTCNAAWPEIQNMLDEIGVQKPSDRPDIVDRVFHIKLRELMTDIKDKQYFGK 732


Top