BLASTX nr result

ID: Cnidium21_contig00045475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045475
         (852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18449.3| unnamed protein product [Vitis vinifera]              116   6e-24
gb|EEE69980.1| hypothetical protein OsJ_29879 [Oryza sativa Japo...   105   1e-20
ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsi...   101   2e-19
ref|XP_002513311.1| splicing endonuclease positive effector sen1...    92   1e-16
gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease p...    72   1e-10

>emb|CBI18449.3| unnamed protein product [Vitis vinifera]
          Length = 2154

 Score =  116 bits (291), Expect = 6e-24
 Identities = 80/234 (34%), Positives = 124/234 (52%), Gaps = 16/234 (6%)
 Frame = +2

Query: 2    GHLFDVDSLSWEKFGCLLSAVAWPSILKCLAEGKAFIDFKMSQMTCIRLLETIPIIFERL 181
            GH    DS S EKF CLLS + WP I KCL EGKAF+D+K+SQ+T   L E   ++ +R 
Sbjct: 852  GHSSVDDSKSREKFSCLLSEITWPFIRKCLVEGKAFVDYKISQLTLGYLFENHALLSKRT 911

Query: 182  QPSLHRCLGNLGILVKNEIDYKWLLD-----LVDWGKSTLAVVLRYWKQTVIXXXXXXXX 346
            + S+        I    +I Y+ +L       + WG       + YW+QT+I        
Sbjct: 912  KASVR-------IFSLKDISYRLVLPRFIFYQIRWGLRLSFCWVGYWRQTMISLLHLLKG 964

Query: 347  XXXXXXXXXIKAIDILINSEKVSMEKLIEQVSCLSVSLFNGGN--------ESEPQYSEA 502
                     I+AI+ LI+ + + M++L EQV+ LSVSL N  +        +S+  +SE 
Sbjct: 965  SCSDKSASFIRAIENLISCDSLMMDELTEQVAHLSVSLSNEASCIVGKTDLKSKAFFSED 1024

Query: 503  SLSKKWRNQPE-RPLSFEKSDIPILGSTTLVK--EGNSVIVLSDDELDTEISAD 655
            S  ++  +  + +P + +  D+ IL S T+    + NSVI+LSDDE + +IS++
Sbjct: 1025 SSFERQHSASDLQPFASDDMDVQILDSVTVSNKMDNNSVIILSDDETEKQISSN 1078


>gb|EEE69980.1| hypothetical protein OsJ_29879 [Oryza sativa Japonica Group]
          Length = 2215

 Score =  105 bits (262), Expect = 1e-20
 Identities = 50/148 (33%), Positives = 85/148 (57%)
 Frame = +2

Query: 17   VDSLSWEKFGCLLSAVAWPSILKCLAEGKAFIDFKMSQMTCIRLLETIPIIFERLQPSLH 196
            VD +SWEKF  LLS   WP I  CL +G   I+ K  Q++C+RLLE +P+++ER+     
Sbjct: 666  VDIISWEKFSTLLSGALWPFIFTCLRKGDDLINTKQCQISCVRLLELVPLVYERVSSYSS 725

Query: 197  RCLGNLGILVKNEIDYKWLLDLVDWGKSTLAVVLRYWKQTVIXXXXXXXXXXXXXXXXXI 376
                 +  +V +  D  WL  L++WGKS+L V++R+WKQ ++                 I
Sbjct: 726  AKSCGVPTMVLDPTDITWLFHLINWGKSSLLVIIRHWKQCMLSLIKILKGSLGGTVQHYI 785

Query: 377  KAIDILINSEKVSMEKLIEQVSCLSVSL 460
            + +  +I+ + V++++L E++S L ++L
Sbjct: 786  EDLGSIISHDAVNIDELSEKISDLKLAL 813


>ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsis thaliana]
            gi|332191377|gb|AEE29498.1| hydrolase domain-containing
            protein [Arabidopsis thaliana]
          Length = 2127

 Score =  101 bits (251), Expect = 2e-19
 Identities = 58/150 (38%), Positives = 80/150 (53%), Gaps = 13/150 (8%)
 Frame = +2

Query: 38   KFGCLLSAVAWPSILKCLAEGKAFIDFKMSQMTCIRLLETIPIIFERLQPSLHRCLGNLG 217
            KF  LL+ VAW  I KCL EGK FI   + QMTC+RLLE +P++  +L+ S        G
Sbjct: 676  KFQYLLAEVAWGIIRKCLVEGKTFIHQSLCQMTCVRLLEILPVVLGKLRVSREESCDTRG 735

Query: 218  ILVKNEIDYKWLLDLVDWGKSTLAVVLRYWKQTVIXXXXXXXXXXXXXXXXXIKAID--- 388
             L K+  D KWL DL+DWG+S L VV+ YWK+ ++                 ++AI    
Sbjct: 736  TL-KDASDLKWLPDLIDWGRSQLKVVVAYWKRALVALLDILQGSNSDACSSAVQAIRHVL 794

Query: 389  ----------ILINSEKVSMEKLIEQVSCL 448
                       L+NS+ V +E+L EQ+S L
Sbjct: 795  SSGDTIDNALTLLNSDDVDIEQLAEQISRL 824


>ref|XP_002513311.1| splicing endonuclease positive effector sen1, putative [Ricinus
            communis] gi|223547219|gb|EEF48714.1| splicing
            endonuclease positive effector sen1, putative [Ricinus
            communis]
          Length = 2110

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 76/252 (30%), Positives = 123/252 (48%), Gaps = 13/252 (5%)
 Frame = +2

Query: 128  QMTCIRLLETIPIIFERLQPSLHRCLGNLGILVKNEIDYKWLLDLVDWGKSTLAVVLRYW 307
            QMTC+R+LE +P+++ERL PS+ +   + G  V+N  D+ WL DL+DWG+S+L VV+ YW
Sbjct: 533  QMTCVRVLEILPVVYERLCPSIRKRSRDSGKTVENLWDFIWLHDLIDWGRSSLKVVVVYW 592

Query: 308  KQTVIXXXXXXXXXXXXXXXXXIKAIDILINSEKVSMEKLIEQVSCLSVSLFNG-GNESE 484
            K+TV                        L+N+  V++++L+EQVS L VSL      +SE
Sbjct: 593  KRTVTS----------------------LLNN--VNVDQLMEQVSHLRVSLSKEVSYDSE 628

Query: 485  PQYSEASL--------SKKWRNQPERPLSFEKSDIPILGSTTLV--KEGNSVIVLSDDEL 634
                E +          +++ +     +  + ++I  L S ++   +E +S+IV+SDDE+
Sbjct: 629  MAKLETTALLPEDLPSLRRYSDSDALVVPLDYTNIETLDSASVPDRREKSSIIVVSDDEV 688

Query: 635  DTEISADVNINSL--SNQSMLDFGIIDNGASDISPQSMLAKENVSSSITSAEIMEFPHHK 808
            D +I     I  +  S    LD   +   A + +      K+ VS S  S  +      K
Sbjct: 689  DEQILHAKVIQPINDSRHGQLDNQTVAPAAEESTLVMDTTKDRVSISKASRGLWNSFEQK 748

Query: 809  GPPDSVNFVSQK 844
               D     SQK
Sbjct: 749  DVLDRSGLTSQK 760


>gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease positive effector SEN1
           [Arabidopsis thaliana]
          Length = 2142

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 13/125 (10%)
 Frame = +2

Query: 113 DFKMSQMTCIRLLETIPIIFERLQPSLHRCLGNLGILVKNEIDYKWLLDLVDWGKSTLAV 292
           +F    MTC+RLLE +P++  +L+ S        G L K+  D KWL DL+DWG+S L V
Sbjct: 607 NFNALPMTCVRLLEILPVVLGKLRVSREESCDTRGTL-KDASDLKWLPDLIDWGRSQLKV 665

Query: 293 VLRYWKQTVIXXXXXXXXXXXXXXXXXIKAID-------------ILINSEKVSMEKLIE 433
           V+ YWK+ ++                 ++AI               L+NS+ V +E+L E
Sbjct: 666 VVAYWKRALVALLDILQGSNSDACSSAVQAIRHVLSSGDTIDNALTLLNSDDVDIEQLAE 725

Query: 434 QVSCL 448
           Q+S L
Sbjct: 726 QISRL 730


Top